RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DPP3Q9NY33 737 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 FLRT1Q9NZU1 646 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 PCDHGC3Q9UN70 934 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 NDUFAB1O14561 156 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 STRNO43815 780 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 GAS8O95995 478 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 CD48P09326 243 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 GCLCP48506 637 aaPredicted RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 RGS7P49802 495 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 TNFAIP2Q03169 654 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 MTM1Q13496 603 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 DGKDQ16760 1214 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 LONRF1Q17RB8 773 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 PPP1R15BQ5SWA1 713 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 SPRYD7Q5W111 196 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 C3orf20Q8ND61 904 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 C18orf25Q96B23 403 aaPredicted RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 SNF8Q96H20 258 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 TMEM176AQ96HP8 235 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ZMAT2Q96NC0 199 aaKnown RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 NFKBIZQ9BYH8 718 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 MORF4L1Q9UBU8 362 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 TUBGCP4Q9UGJ1 667 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 PARP2Q9UGN5 583 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ZNF148Q9UQR1 794 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 E7EVH7 732 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 TULP2O00295 520 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CILPO75339 1184 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CYP3A5P20815 502 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 AKAP5P24588 427 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 YWHAEP62258 255 aaKnown RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 BEX3Q00994 111 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 PTK6Q13882 451 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 KYNUQ16719 465 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 SPOCD1Q6ZMY3 1216 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CATSPER4Q7RTX7 472 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 FAM49BQ9NUQ9 324 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 KLK14Q9P0G3 267 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CTNNAL1Q9UBT7 734 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 A0A1B0GUA9 196 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 TRIM66O15016 1216 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 LRCH4O75427 683 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 IFNB1P01574 187 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 PPP2R2AP63151 447 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CDO1Q16878 200 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 P3H1Q32P28 736 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 IZUMO3Q5VZ72 239 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 CAPN12Q6ZSI9 719 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 SESTD1Q86VW0 696 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 XYLT1Q86Y38 959 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 HSPH1Q92598 858 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 RUNDC3BQ96NL0 473 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 NXF3Q9H4D5 531 aaKnown RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 SLC12A6Q9UHW9 1150 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
TPM1-210ENST00000558264 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
TPM1-210ENST00000558264 MED7O43513 233 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 LIASO43766 372 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 NUDT17P0C025 328 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 SMIM10L2AP0DMW4 78 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 SMIM10L2BP0DMW5 78 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 HOXA11P31270 313 aaPredicted RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 MAN1A1P33908 653 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 CCNG2Q16589 344 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 PTGISQ16647 500 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 C2orf69Q8N8R5 385 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 MAIP1Q8WWC4 291 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 DNAJB3Q8WWF6 145 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 C9orf72Q96LT7 481 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 LOC102724159A0A0B4J2E5 919 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 RGS16O15492 202 aaPredicted RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 RARGP13631 454 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 CYP2B6P20813 491 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 NRLP54845 237 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 PWP2Q15269 919 aaKnown RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 FAM110CQ1W6H9 321 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 AGBL2Q5U5Z8 902 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 RHBDF2Q6PJF5 856 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms