RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 AFPP02771 609 aaKnown RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 ODC1P11926 461 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 EPCAMP16422 314 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 CLCN1P35523 988 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 NRIP1P48552 1158 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 NOP14P78316 857 aaKnown RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 MYL7Q01449 175 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ROR1Q01973 937 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 APBA1Q02410 837 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 YWHAHQ04917 246 aaPredicted RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 DLX2Q07687 328 aaPredicted RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 MYO1EQ12965 1108 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ADAM15Q13444 863 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 RAB33AQ14088 237 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 MAN2A1Q16706 1144 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 SGSM1Q2NKQ1 1148 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ZNF699Q32M78 642 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 WDR72Q3MJ13 1102 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 OVOS1Q6IE37 1185 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 DSTYKQ6XUX3 929 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 TMEM184AQ6ZMB5 413 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ANKS3Q6ZW76 656 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 DPH6Q7L8W6 267 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 RBM23Q86U06 439 aaKnown RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 LUZP1Q86V48 1076 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 LRRTM3Q86VH5 581 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 EFHBQ8N7U6 833 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 SPATA18Q8TC71 538 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ARID3AQ99856 593 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 TUBGCP2Q9BSJ2 902 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 SIX2Q9NPC8 291 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD8-214ENST00000557727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD8-214ENST00000557727 CLEC1BQ9P126 229 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 HMGXB4Q9UGU5 601 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 CDY1Q9Y6F8 540 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 GTPBP10A4D1E9 387 aaKnown RBP9.65□□□□□ -0.86
CHD8-214ENST00000557727 TGM5O43548 720 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 PHACTR2O75167 634 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 C1RP00736 705 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 FAM163BP0C2L3 166 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 OR4Q2P0C623 313 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 JUNDP17535 347 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 LMO2P25791 158 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 OR1D2P34982 312 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 NDUFV1P49821 464 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 CDH8P55286 799 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 SKOR1P84550 965 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TRPC3Q13507 836 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 CTXN3Q4LDR2 81 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 VWA3BQ502W6 1294 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 ARHGEF19Q8IW93 802 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 APPL2Q8NEU8 664 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 MICAL1Q8TDZ2 1067 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 WHAMMQ8TF30 809 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 KAT5Q92993 513 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TWNKQ96RR1 684 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 CDCA3Q99618 268 aaPredicted RBP9.65□□□□□ -0.86
CHD8-214ENST00000557727 NIF3L1Q9GZT8 377 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 NAT10Q9H0A0 1025 aaKnown RBP9.65□□□□□ -0.86
CHD8-214ENST00000557727 ZCWPW1Q9H0M4 648 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 CRISPLD1Q9H336 500 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 NDST4Q9H3R1 872 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TLE6Q9H808 572 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 PRDM6Q9NQX0 595 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TMLHEQ9NVH6 421 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TAB2Q9NYJ8 693 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.86
CHD8-214ENST00000557727 FBXW11Q9UKB1 542 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 AJAP1Q9UKB5 411 aaPredicted RBP9.65□□□□□ -0.86
CHD8-214ENST00000557727 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 TTC28Q96AY4 2481 aa9.65□□□□□ -0.86
CHD8-214ENST00000557727 N4BP1O75113 896 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 ATP2C2O75185 946 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 SEC24AO95486 1093 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 CAVIN2O95810 425 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 SLC9A1P19634 815 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 ACO1P21399 889 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 ACAT1P24752 427 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 PON1P27169 355 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 MTIF2P46199 727 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 CCDC85BQ15834 202 aaPredicted RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 ZNF667Q5HYK9 610 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 ZNF280DQ6N043 979 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 FAM171BQ6P995 826 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms