RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 LIMA1Q9UHB6 759 aaKnown RBP14.6□□□□□ -0.07
SHMT2-234ENST00000557703 USTQ9Y2C2 406 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 ATP8B3O60423 1300 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 MBTPS2O43462 519 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 CILPO75339 1184 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 LMO2P25791 158 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 EPHB3P54753 998 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 CBX2Q14781 532 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 MIIPQ5JXC2 388 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 FKBP15Q5T1M5 1219 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 SCARA3Q6AZY7 606 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 IQCEQ6IPM2 695 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 PTCRAQ6ISU1 281 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 SPATA2LQ8IUW3 424 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 SLC7A14Q8TBB6 771 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 MRPL45Q9BRJ2 306 aaKnown RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 PI4K2AQ9BTU6 479 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 ELOVL4Q9GZR5 314 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 SMYD3Q9H7B4 428 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 GCNT4Q9P109 453 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 ZMYM5Q9UJ78 669 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 INSL5Q9Y5Q6 135 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-234ENST00000557703 TSC2P49815 1807 aa14.59□□□□□ -0.07
SHMT2-234ENST00000557703 SPTBN5Q9NRC6 3674 aaKnown RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 SOBPA7XYQ1 873 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 H3BQ06 376 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 ZNF197O14709 1029 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 PDGFRBP09619 1106 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 HAPLN1P10915 354 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 PTPN2P17706 415 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 NDST1P52848 882 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 MFAP3P55082 362 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 DUSP4Q13115 394 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 VEPH1Q14D04 833 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 IQCB1Q15051 598 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 KRT31Q15323 416 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 SPOPLQ6IQ16 392 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 LRSAM1Q6UWE0 723 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 LRRTM3Q86VH5 581 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 OSTM1Q86WC4 334 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 AOPEPQ8N6M6 819 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 FAM200AQ8TCP9 573 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 SMG7Q92540 1137 aaKnown RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 ZNF512Q96ME7 567 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 PIDD1Q9HB75 910 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 WDR6Q9NNW5 1121 aaKnown RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 APEX2Q9UBZ4 518 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 GTF3C4Q9UKN8 822 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
SHMT2-234ENST00000557703 USP15Q9Y4E8 981 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-234ENST00000557703 XIRP2A4UGR9 3374 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 GOLGA6L19H0YKK7 550 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 TRIM66O15016 1216 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PAEPP09466 180 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 SPATA31D3P0C874 917 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 CDH8P55286 799 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 STILQ15468 1287 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 FILIP1LQ4L180 1135 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 RARS2Q5T160 578 aaKnown RBP14.57□□□□□ -0.08
SHMT2-234ENST00000557703 TMC5Q6UXY8 1006 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 SPATA31D4Q6ZUB0 917 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PPM1KQ8N3J5 372 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 ATAD1Q8NBU5 361 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 TATDN2Q93075 761 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 ZNF707Q96C28 371 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-234ENST00000557703 TMEM176AQ96HP8 235 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PHF7Q9BWX1 381 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-234ENST00000557703 INTS2Q9H0H0 1204 aaKnown RBP14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 CRTAC1Q9NQ79 661 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 CNTN6Q9UQ52 1028 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 NR2E1Q9Y466 385 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 PLXNA3P51805 1871 aa14.57□□□□□ -0.08
SHMT2-234ENST00000557703 MYBPHLA2RUH7 354 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 SEC24AO95486 1093 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 OR4Q2P0C623 313 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 CSH1P0DML2 217 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 CSH2P0DML3 217 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 BMP1P13497 986 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 PON1P27169 355 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 EPHA5P54756 1037 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 SLC8A3P57103 927 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 ZNF445P59923 1031 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 MEA1Q16626 185 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 MGAT5BQ3V5L5 792 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 CYP4A22Q5TCH4 519 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 SCARA5Q6ZMJ2 495 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 FMNL3Q8IVF7 1028 aa14.56□□□□□ -0.08
SHMT2-234ENST00000557703 PSMG2Q969U7 264 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms