RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ITIH3Q06033 890 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 MLC1Q15049 377 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 LLGL1Q15334 1064 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 LONRF3Q496Y0 759 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 RD3Q7Z3Z2 195 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 FAM109AQ8N4B1 249 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 MAGEB6Q8N7X4 407 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 BOLLQ8N9W6 283 aaKnown RBP6.25□□□□□ -1.41
GPHN-215ENST00000557654 FAM136AQ96C01 138 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 KLC4Q9NSK0 619 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 PLEKHM1Q9Y4G2 1056 aa6.25□□□□□ -1.41
GPHN-215ENST00000557654 PPFIA2O75334 1257 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 NR2F6P10588 404 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 GRIA3P42263 894 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 AGFG1P52594 562 aaKnown RBP6.24□□□□□ -1.41
GPHN-215ENST00000557654 CACNA2D1P54289 1103 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 NXPH1P58417 271 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 ANO6Q4KMQ2 910 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 PRIMA1Q86XR5 153 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 TCEAL8Q8IYN2 117 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
GPHN-215ENST00000557654 FKBP10Q96AY3 582 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 PIH1D1Q9NWS0 290 aaKnown RBP6.24□□□□□ -1.41
GPHN-215ENST00000557654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.24□□□□□ -1.41
GPHN-215ENST00000557654 KLHL42Q9P2K6 505 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 XPR1Q9UBH6 696 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 TCEAL9Q9UHQ7 104 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 SERTAD3Q9UJW9 196 aa6.24□□□□□ -1.41
GPHN-215ENST00000557654 A0A1W2PPL8 197 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 SOAT2O75908 522 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 C1QL1O75973 258 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 ERBB2P04626 1255 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 SLC11A2P49281 568 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 NBPF8Q3BBV2 869 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 MINDY4Q4G0A6 757 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 ARHGAP29Q52LW3 1261 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 TSTD2Q5T7W7 516 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 NXNQ6DKJ4 435 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 RFKQ969G6 155 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 TRIM54Q9BYV2 358 aa6.23□□□□□ -1.41
GPHN-215ENST00000557654 LRRC3CA6NJW4 275 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 TMEM233B4DJY2 109 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 hCG_1984214I3L0E3 225 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 IGLV2-14P01704 120 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 ATXN1LP0C7T5 689 aaKnown RBP6.22□□□□□ -1.41
GPHN-215ENST00000557654 PXNP49023 591 aaPredicted RBP6.22□□□□□ -1.41
GPHN-215ENST00000557654 ARFIP2P53365 341 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 IQCB1Q15051 598 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 TBCCQ15814 346 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 AMOTQ4VCS5 1084 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 AKNAD1Q5T1N1 836 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 ARHGAP40Q5TG30 622 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 LAYNQ6UX15 382 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 ZNF280BQ86YH2 543 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 SLC15A4Q8N697 577 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 IL31RAQ8NI17 732 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 CPNE5Q9HCH3 593 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 SEMA4GQ9NTN9 838 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 SSX2IPQ9Y2D8 614 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 MRPS17Q9Y2R5 130 aaKnown RBP6.22□□□□□ -1.41
GPHN-215ENST00000557654 TMX2Q9Y320 296 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.22□□□□□ -1.41
GPHN-215ENST00000557654 USP19O94966 1318 aa6.22□□□□□ -1.41
GPHN-215ENST00000557654 PCSK6P29122 969 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 CLCN2P51788 898 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 LOXL3P58215 753 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 CTBP1Q13363 440 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 CNN3Q15417 329 aaKnown RBP6.21□□□□□ -1.42
GPHN-215ENST00000557654 DPY19L2P1Q6NXN4 242 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 MAEAQ7L5Y9 396 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 MAVSQ7Z434 540 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 C14orf80Q86SX3 495 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 ZNF575Q86XF7 245 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 KIAA0319LQ8IZA0 1049 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 MYO1HQ8N1T3 1032 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 DNAJC5GQ8N7S2 189 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 PBKQ96KB5 322 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 C22orf23Q9BZE7 217 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 TMEM60Q9H2L4 133 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 PTGFRNQ9P2B2 879 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 SLC17A6Q9P2U8 582 aa6.21□□□□□ -1.42
GPHN-215ENST00000557654 CAPN8A6NHC0 703 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 VSTM5A8MXK1 200 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 BTN3A1O00481 513 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 TBX3O15119 743 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 PHGDHO43175 533 aaKnown RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 URI1O94763 535 aaPredicted RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 ZFXP17010 805 aaPredicted RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 SLC7A1P30825 629 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 GPSM2P81274 684 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
GPHN-215ENST00000557654 GRM3Q14832 879 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 RGS7BPQ6MZT1 257 aaPredicted RBP6.2□□□□□ -1.42
GPHN-215ENST00000557654 AMIGO2Q86SJ2 522 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 RASAL3Q86YV0 1011 aa6.2□□□□□ -1.42
GPHN-215ENST00000557654 MAML1Q92585 1016 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms