RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CDR1P51861 262 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 KCNH2Q12809 1159 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 MAPRE1Q15691 268 aaKnown RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 MGAT5BQ3V5L5 792 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 FAM171BQ6P995 826 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 GRASPQ7Z6J2 395 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 IRF2BP1Q8IU81 584 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 SPATA2LQ8IUW3 424 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 FAXDC2Q96IV6 333 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 RPGRIP1Q96KN7 1286 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 PKMYT1Q99640 499 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 SEPT5Q99719 369 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 BCO2Q9BYV7 579 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 SDCBP2Q9H190 292 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 CYP3A43Q9HB55 503 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 ABCB6Q9NP58 842 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 MAGEC2Q9UBF1 373 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 GTF3C4Q9UKN8 822 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 NR2E1Q9Y466 385 aa14.51□□□□□ -0.09
SHMT2-228ENST00000557302 TCF20Q9UGU0 1960 aaKnown RBP14.51□□□□□ -0.09
SHMT2-228ENST00000557302 ATP2C2O75185 946 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 HAPLN1P10915 354 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 SSTR3P32745 418 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 EPHB3P54753 998 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 TYRO3Q06418 890 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 CCDC142Q17RM4 750 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 IQCEQ6IPM2 695 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 C4orf50Q6ZRC1 276 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 C11orf57Q6ZUT1 292 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 TTC9BQ8N6N2 239 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 ENOX1Q8TC92 643 aaKnown RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 MYLPFQ96A32 169 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 FUBP3Q96I24 572 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 TNIP3Q96KP6 325 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 ZNF512Q96ME7 567 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-228ENST00000557302 DPEP3Q9H4B8 488 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 CRTAC1Q9NQ79 661 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 NFE2L3Q9Y4A8 694 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 NME7Q9Y5B8 376 aa14.5□□□□□ -0.09
SHMT2-228ENST00000557302 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 LOC730098B7Z3J9 87 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 SOAT2O75908 522 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 LETM1O95202 739 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 PTPN2P17706 415 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 PTPN1P18031 435 aaKnown RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 SP100P23497 879 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 NDST1P52848 882 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 NTHL1P78549 312 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 INCA1Q0VD86 236 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 VEPH1Q14D04 833 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 CFAP221Q4G0U5 840 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 PABPC1LQ4VXU2 614 aaKnown RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 MDH1BQ5I0G3 518 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 OTOP3Q7RTS5 596 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 UNC93AQ86WB7 457 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 GJD3Q8N144 294 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 TTC39CQ8N584 583 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 TDRD5Q8NAT2 981 aaKnown RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 B3GALNT2Q8NCR0 500 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 TATDN2Q93075 761 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 ACSF2Q96CM8 615 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 DNAJC25Q9H1X3 360 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 HCFC1R1Q9NWW0 138 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 CEP72Q9P209 647 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 DNMT3BQ9UBC3 853 aaKnown RBP14.49□□□□□ -0.09
SHMT2-228ENST00000557302 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 ASB3Q9Y575 518 aa14.49□□□□□ -0.09
SHMT2-228ENST00000557302 RHOP08100 348 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 ATF6P18850 670 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 CD58P19256 250 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 FSHRP23945 695 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 CYP2F1P24903 491 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 MAGEA11P43364 429 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 RPL10AP62906 217 aaKnown RBP14.48□□□□□ -0.09
SHMT2-228ENST00000557302 CYP27A1Q02318 531 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 LRMPQ12912 555 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 HSP90AA4PQ58FG1 418 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 GET4Q7L5D6 327 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-228ENST00000557302 ITIH5Q86UX2 942 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 LEMD2Q8NC56 503 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 FAM200AQ8TCP9 573 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 PCED1BQ96HM7 432 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 NT5C1BQ96P26 610 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 CORO1BQ9BR76 489 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 DNAI2Q9GZS0 605 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 NAT10Q9H0A0 1025 aaKnown RBP14.48□□□□□ -0.09
SHMT2-228ENST00000557302 ASAH2Q9NR71 780 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 SAMSN1Q9NSI8 373 aaKnown RBP14.48□□□□□ -0.09
SHMT2-228ENST00000557302 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
SHMT2-228ENST00000557302 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
SHMT2-228ENST00000557302 KCNJ18B7U540 433 aa14.47□□□□□ -0.09
SHMT2-228ENST00000557302 C2CD4DB7Z1M9 353 aa14.47□□□□□ -0.09
SHMT2-228ENST00000557302 CILPO75339 1184 aa14.47□□□□□ -0.09
SHMT2-228ENST00000557302 PRKCSHP14314 528 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-228ENST00000557302 TBXAS1P24557 533 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-228ENST00000557302 EEF1GP26641 437 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms