RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 HAPLN1P10915 354 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 HMGA1P17096 107 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 CDC25CP30307 473 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 ADSSP30520 456 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 ABCD1P33897 745 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 TAF6P49848 677 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 SMARCB1Q12824 385 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 KARSQ15046 597 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 PON2Q15165 354 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 CSRP2Q16527 193 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 ARHGAP15Q53QZ3 475 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 WSCD1Q658N2 575 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 PRR23BQ6ZRT6 265 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 RIN3Q8TB24 985 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 NETO1Q8TDF5 533 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 LARP4BQ92615 738 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 IKZF4Q9H2S9 585 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 HPS4Q9NQG7 708 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 DPP3Q9NY33 737 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
HNRNPC-230ENST00000557201 FAM237AA0A1B0GTK4 181 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 OTOL1A6NHN0 477 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 ADRB1P08588 477 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CDR1P51861 262 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 WNT7BP56706 349 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 ITPRIPL2Q3MIP1 535 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 MGAT5BQ3V5L5 792 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 TMEM196Q5HYL7 178 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 PKN3Q6P5Z2 889 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CCDC73Q6ZRK6 1079 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 PRR23CQ6ZRP0 262 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 ZNF720Q7Z2F6 126 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 WDR5BQ86VZ2 330 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CMTM8Q8IZV2 173 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CXorf38Q8TB03 319 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 PYM1Q9BRP8 204 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 SMG9Q9H0W8 520 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 ZMYM5Q9UJ78 669 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 AGO2Q9UKV8 859 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CCL26Q9Y258 94 aa11.55□□□□□ -0.56
HNRNPC-230ENST00000557201 CCDC163A0A0D9SF12 145 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 SOBPA7XYQ1 873 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 KPNA7A9QM74 516 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 EXTL3O43909 919 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 NLRP12P59046 1061 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 VEPH1Q14D04 833 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 HEATR6Q6AI08 1181 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 SLFN12LQ6IEE8 588 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 FSTL4Q6MZW2 842 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 RASSF8Q8NHQ8 419 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 GIPC2Q8TF65 315 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 GKN1Q9NS71 199 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 FAM13BQ9NYF5 915 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 HPSEQ9Y251 543 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 A0A087X0B3 334 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 GOLGA6L4A6NEF3 574 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 GDF9O60383 454 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 TBCAO75347 108 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 TADA3O75528 432 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 GPR15P49685 360 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 KCNA1Q09470 495 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 RUNX3Q13761 415 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 E2F4Q16254 413 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 SV2CQ496J9 727 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 METTL23Q86XA0 190 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 SFR1Q86XK3 245 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 THEM5Q8N1Q8 247 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 HVCN1Q96D96 273 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 CUEDC2Q9H467 287 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 ZHX3Q9H4I2 956 aa11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 THG1LQ9NWX6 298 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 ABI2Q9NYB9 513 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-230ENST00000557201 DENND4CQ5VZ89 1909 aa11.53□□□□□ -0.56
HNRNPC-230ENST00000557201 TM4SF5O14894 197 aa11.53□□□□□ -0.56
HNRNPC-230ENST00000557201 IL18RAPO95256 599 aa11.53□□□□□ -0.56
HNRNPC-230ENST00000557201 DDX6P26196 483 aaKnown RBP eCLIP11.53□□□□□ -0.56
HNRNPC-230ENST00000557201 RAP1GAPP47736 663 aa11.53□□□□□ -0.56
HNRNPC-230ENST00000557201 ZNF268Q14587 947 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms