RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ARHGEF3Q9NR81 526 aa5.4□□□□□ -1.54
SCFD1-223ENST00000557076 SPATA6Q9NWH7 488 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-223ENST00000557076 GMEB2Q9UKD1 530 aa5.4□□□□□ -1.54
SCFD1-223ENST00000557076 CA14Q9ULX7 337 aa5.4□□□□□ -1.54
SCFD1-223ENST00000557076 ST3GAL5Q9UNP4 418 aa5.4□□□□□ -1.54
SCFD1-223ENST00000557076 TRPV2Q9Y5S1 764 aa5.4□□□□□ -1.54
SCFD1-223ENST00000557076 CCDC171Q6TFL3 1326 aa5.4□□□□□ -1.55
SCFD1-223ENST00000557076 MYH4Q9Y623 1939 aa5.4□□□□□ -1.55
SCFD1-223ENST00000557076 LOC400499M0QZD8 3231 aa5.4□□□□□ -1.55
SCFD1-223ENST00000557076 MAST4O15021 2626 aa5.4□□□□□ -1.55
SCFD1-223ENST00000557076 HELZ2Q9BYK8 2649 aaKnown RBP5.4□□□□□ -1.55
SCFD1-223ENST00000557076 NAV2Q8IVL1 2488 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 SMG1Q96Q15 3661 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 GSTTP1A0A1W2PQM5 241 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 KANSL1LA0AUZ9 987 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 ANHXE9PGG2 379 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 GCOM1H8Y6P7 765 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 FOXP2O15409 715 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 FIBPO43427 364 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 N4BP1O75113 896 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 RETP07949 1114 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 POLR2MP0CAP2 368 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 GOLGA8HP0CJ92 632 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CTSAP10619 480 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 FGFR1P11362 822 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 INSRRP14616 1297 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 EPCAMP16422 314 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 TCF7P36402 384 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 TRAF1Q13077 416 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CSRP2Q16527 193 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CCDC178Q5BJE1 867 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 RSPO2Q6UXX9 243 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 ZPBP2Q6X784 338 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 DDX53Q86TM3 631 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 FAM129CQ86XR2 697 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 TMEFF1Q8IYR6 380 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 VPS52Q8N1B4 723 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CMASQ8NFW8 434 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 IL31RAQ8NI17 732 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 STAMQ92783 540 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CLDN23Q96B33 292 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 MTMR8Q96EF0 704 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 NELL2Q99435 816 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 SEC62Q99442 399 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 PRDM14Q9GZV8 571 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 FAM49AQ9H0Q0 323 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CPVLQ9H3G5 476 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 JMJD4Q9H9V9 463 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 VAT1LQ9HCJ6 419 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 WDR6Q9NNW5 1121 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 CHST7Q9NS84 486 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 KBTBD4Q9NVX7 518 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 KLHL14Q9P2G3 628 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 GPR55Q9Y2T6 319 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.39□□□□□ -1.55
SCFD1-223ENST00000557076 UNC79Q9P2D8 2635 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 F5P12259 2224 aa5.39□□□□□ -1.55
SCFD1-223ENST00000557076 SMIM35A0A1B0GVV1 85 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 GREM1O60565 184 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 RPS6KA5O75582 802 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 FGAP02671 866 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 CELA3BP08861 270 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 HOXA13P31271 388 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 NT5C2P49902 561 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 LIMK1P53667 647 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 CYP4F8P98187 520 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 TMEM266Q2M3C6 531 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 SKOR2Q2VWA4 1001 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 SLC44A4Q53GD3 710 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 ASPRV1Q53RT3 343 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 ZBTB41Q5SVQ8 909 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 LAIR1Q6GTX8 287 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 FBXL19Q6PCT2 694 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 NLRC3Q7RTR2 1065 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 TMC6Q7Z403 805 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 SLCO6A1Q86UG4 719 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 KIAA0319LQ8IZA0 1049 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 FEZF2Q8TBJ5 459 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 RSPH1Q8WYR4 309 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 MAP4K1Q92918 833 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 EAF1Q96JC9 268 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 ZBP1Q9H171 429 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 TNFRSF12AQ9NP84 129 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 SEMA4GQ9NTN9 838 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 ERVK13-1Q9NX77 482 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 STK39Q9UEW8 545 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 DPP7Q9UHL4 492 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 RAB23Q9ULC3 237 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 NOC2LQ9Y3T9 749 aaKnown RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 TELO2Q9Y4R8 837 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 LAMA1P25391 3075 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 LAMA5O15230 3695 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 FANCMQ8IYD8 2048 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms