RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PTPRDP23468 1912 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 MYBPHLA2RUH7 354 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 P4HA1P13674 534 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 GNL1P36915 607 aaPredicted RBP24.44■■□□□ 1.5
TDP1-216ENST00000556867 CDR1P51861 262 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 PAK1Q13153 545 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 MTMR3Q13615 1198 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 CCDC142Q17RM4 750 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 KRT39Q6A163 491 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 TMC8Q8IU68 726 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 HS6ST3Q8IZP7 471 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 OR6B3Q8NGW1 331 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 TAS1R2Q8TE23 839 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 ING5Q8WYH8 240 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 PSMG2Q969U7 264 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 NXPE3Q969Y0 559 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 FUBP3Q96I24 572 aaKnown RBP eCLIP24.44■■□□□ 1.5
TDP1-216ENST00000556867 LRRC3Q9BY71 257 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 KCNK12Q9HB15 430 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 C11orf16Q9NQ32 467 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 CRTAC1Q9NQ79 661 aa24.44■■□□□ 1.5
TDP1-216ENST00000556867 ANHXE9PGG2 379 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 ATP2C2O75185 946 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 CLSTN1O94985 981 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 PDGFRBP09619 1106 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 CEBPBP17676 345 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 CCR2P41597 374 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 MXI1P50539 228 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 PSMC1P62191 440 aaKnown RBP24.43■■□□□ 1.5
TDP1-216ENST00000556867 VEPH1Q14D04 833 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 MAPRE1Q15691 268 aaKnown RBP24.43■■□□□ 1.5
TDP1-216ENST00000556867 CFAP221Q4G0U5 840 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 FILIP1Q7Z7B0 1213 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 ITIH5Q86UX2 942 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 UBALD2Q8IYN6 164 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 ELMO3Q96BJ8 720 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 TCEAL4Q96EI5 215 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 PI4K2AQ9BTU6 479 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 IMPG2Q9BZV3 1241 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 NUP62CLQ9H1M0 184 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 MMRN2Q9H8L6 949 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 GDE1Q9NZC3 331 aa24.43■■□□□ 1.5
TDP1-216ENST00000556867 ARMCX3Q9UH62 379 aaPredicted RBP24.43■■□□□ 1.5
TDP1-216ENST00000556867 GOLGA6L22H0YM25 854 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 GPR37L1O60883 481 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 HTR4Q13639 388 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 DCAF17Q5H9S7 520 aaPredicted RBP24.42■■□□□ 1.5
TDP1-216ENST00000556867 SPOPLQ6IQ16 392 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 SCARA5Q6ZMJ2 495 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 C4orf50Q6ZRC1 276 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 DNAJB7Q7Z6W7 309 aaPredicted RBP24.42■■□□□ 1.5
TDP1-216ENST00000556867 SPATA2LQ8IUW3 424 aaPredicted RBP24.42■■□□□ 1.5
TDP1-216ENST00000556867 LPIN3Q9BQK8 851 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 SDCBP2Q9H190 292 aa24.42■■□□□ 1.5
TDP1-216ENST00000556867 METTL14Q9HCE5 456 aaKnown RBP24.42■■□□□ 1.5
TDP1-216ENST00000556867 NRG2O14511 850 aaPredicted RBP24.41■■□□□ 1.5
TDP1-216ENST00000556867 MOSPD3O75425 235 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 MYL4P12829 197 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 ASPAP45381 313 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 NOP14P78316 857 aaKnown RBP24.41■■□□□ 1.5
TDP1-216ENST00000556867 TDGQ13569 410 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 TMEM31Q5JXX7 168 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 TCERG1LQ5VWI1 586 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 FRMD5Q7Z6J6 570 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 MYCBPAPQ8TBZ2 947 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 MYLPFQ96A32 169 aa24.41■■□□□ 1.5
TDP1-216ENST00000556867 FAM86C2PA6NEL3 165 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 A8MXQ7 604 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 CYP2F1P24903 491 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 MAGEA11P43364 429 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 RAP1GAPP47736 663 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 CDH8P55286 799 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 STX17P56962 302 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 RPL10AP62906 217 aaKnown RBP24.4■■□□□ 1.5
TDP1-216ENST00000556867 SIGLEC14Q08ET2 396 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 TRIM67Q6ZTA4 783 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 MTSS1LQ765P7 747 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 FBXL13Q8NEE6 735 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 SHKBP1Q8TBC3 707 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 FAM200AQ8TCP9 573 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 RSAD2Q8WXG1 361 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 SLC35C1Q96A29 364 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 BCO2Q9BYV7 579 aa24.4■■□□□ 1.5
TDP1-216ENST00000556867 APOBEC3GQ9HC16 384 aaKnown RBP24.4■■□□□ 1.5
TDP1-216ENST00000556867 ZNF334Q9HCZ1 680 aaPredicted RBP24.4■■□□□ 1.5
TDP1-216ENST00000556867 FGF19O95750 216 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 PTPN1P18031 435 aaKnown RBP24.39■■□□□ 1.49
TDP1-216ENST00000556867 GPR15P49685 360 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 MDH1BQ5I0G3 518 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 POTEHQ6S545 545 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 MLKLQ8NB16 471 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 B3GALNT2Q8NCR0 500 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 CCDC150Q8NCX0 1101 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 GIPC2Q8TF65 315 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 SEMA4DQ92854 862 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 MCRS1Q96EZ8 462 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 PCED1BQ96HM7 432 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 NIF3L1Q9GZT8 377 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 SMOC2Q9H3U7 446 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 DPEP3Q9H4B8 488 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms