RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PI4K2BG5E9Z4 385 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 M0QZ92 97 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 RFC1P35251 1148 aaPredicted RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 GGCXP38435 758 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 SP3Q02447 781 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 SOX4Q06945 474 aaPredicted RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 NOGQ13253 232 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CCDC137Q6PK04 289 aaKnown RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 EMC1Q8N766 993 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 C3orf20Q8ND61 904 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 JOSD2Q8TAC2 188 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CAVIN3Q969G5 261 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 RNF25Q96BH1 459 aaPredicted RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 OSBPL7Q9BZF2 842 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 FAM49BQ9NUQ9 324 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 STAU1O95793 577 aaKnown RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CDR1P51861 262 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CNGA2Q16280 664 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 PPP1R15BQ5SWA1 713 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ANKS1BQ7Z6G8 1248 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 JAMLQ86YT9 394 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CCDC105Q8IYK2 499 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 OR6B3Q8NGW1 331 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ATG4AQ8WYN0 398 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 CAPNS2Q96L46 248 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ZFP42Q96MM3 310 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 FAM118BQ9BPY3 351 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 PLVAPQ9BX97 442 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ACBD3Q9H3P7 528 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 TSPAN16Q9UKR8 245 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 UBQLN1Q9UMX0 589 aaKnown RBP19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 ST3GAL5Q9UNP4 418 aa19.36■□□□□ 0.69
SDR39U1-220ENST00000556548 SPTLC1O15269 473 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 CHRNA1P02708 482 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 RALAP11233 206 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 KRT3P12035 628 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 HSPA6P17066 643 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 GPD2P43304 727 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 ZNF618Q5T7W0 954 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 TXNRD3NBQ6F5E7 133 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 UPF3AQ9H1J1 476 aaKnown RBP19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 METTL5Q9NRN9 209 aaKnown RBP19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 CACNG4Q9UBN1 327 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 GOLGA6BA6NDN3 693 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 RPS6KA5O75582 802 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 TRPA1O75762 1119 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 PDGFRBP09619 1106 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 CHRNA3P32297 505 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 FLT3P36888 993 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 PDCLQ13371 301 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 CUL1Q13616 776 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 SOWAHAQ2M3V2 549 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 HSP90B2PQ58FF3 399 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 PPP1R26Q5T8A7 1209 aaPredicted RBP19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 XYLT1Q86Y38 959 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 DPEP3Q9H4B8 488 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 STRIP2Q9ULQ0 834 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 TRPV2Q9Y5S1 764 aa19.35■□□□□ 0.69
SDR39U1-220ENST00000556548 AGPSO00116 658 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 FSCN2O14926 492 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 PSTPIP1O43586 416 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 PTGIRP43119 386 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 RGS7P49802 495 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 GOLGA7BQ2TAP0 167 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 DEFB115Q30KQ5 88 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 SNX24Q9Y343 169 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 BHMG1C9JSJ3 638 aaPredicted RBP19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 SYF2O95926 243 aaKnown RBP19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 HMGCRP04035 888 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 IGFBP6P24592 240 aaPredicted RBP19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 PSMA2P25787 234 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 COILP38432 576 aaPredicted RBP19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 PPP2R5EQ16537 467 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 LRRC52Q8N7C0 313 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 ERP44Q9BS26 406 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 CHST7Q9NS84 486 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 VPS18Q9P253 973 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
SDR39U1-220ENST00000556548 THPOP40225 353 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 AFF1P51825 1210 aaKnown RBP19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 KAZNQ674X7 775 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 RSPH3Q86UC2 560 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 LPPQ93052 612 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 RAB17Q9H0T7 212 aa19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 R3HDM2Q9Y2K5 976 aaKnown RBP19.33■□□□□ 0.69
SDR39U1-220ENST00000556548 GRIN2DO15399 1336 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 SIGLEC16A6NMB1 481 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 A8MXQ7 604 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 KPNA7A9QM74 516 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 PIRO00625 290 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 LMO2P25791 158 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 MAN1A1P33908 653 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 LCLAT1Q6UWP7 414 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 SERINC5Q86VE9 423 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 KATNAL2Q8IYT4 538 aa19.33■□□□□ 0.68
SDR39U1-220ENST00000556548 ERICH4A6NGS2 130 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms