RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 MRPL38Q96DV4 380 aaKnown RBP18.55■□□□□ 0.56
TUBB3-211ENST00000556536 FAM122AQ96E09 287 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 TMEM176AQ96HP8 235 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 KLHL5Q96PQ7 755 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 PKMYT1Q99640 499 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 NT5C1AQ9BXI3 368 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 ZCWPW1Q9H0M4 648 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 CRTAC1Q9NQ79 661 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.55■□□□□ 0.56
TUBB3-211ENST00000556536 TMLHEQ9NVH6 421 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 FNIP2Q9P278 1114 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 CDH9Q9ULB4 789 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.55■□□□□ 0.56
TUBB3-211ENST00000556536 TSC2P49815 1807 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 A0A1W2PQJ5 194 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 MYBPHLA2RUH7 354 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 IGFBP4P22692 258 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 TBX2Q13207 712 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 INTS6LQ5JSJ4 861 aaKnown RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 PDE12Q6L8Q7 609 aaKnown RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 ADGRD2Q7Z7M1 963 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 FAM71AQ8IYT1 594 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 B3GALNT2Q8NCR0 500 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 SPAG5Q96R06 1193 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 OXCT2Q9BYC2 517 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-211ENST00000556536 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 ACP6Q9NPH0 428 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 GTF3C4Q9UKN8 822 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 CAPN11Q9UMQ6 739 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 BDP1A6H8Y1 2624 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 REV3LO60673 3130 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 VWA8A3KMH1 1905 aa18.54■□□□□ 0.56
TUBB3-211ENST00000556536 TRANK1O15050 2925 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 LRRC53A6NM62 1247 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 CYP26A1O43174 497 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 GFPT2O94808 682 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 CDC25BP30305 580 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 CASP14P31944 242 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 CLCN1P35523 988 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 SOX5P35711 763 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 NDUFV1P49821 464 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 TSPY1Q01534 308 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 ROR1Q01973 937 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 CREMQ03060 361 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 GOLGA8FQ08AF8 430 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 GOLGA8DPQ0D2H9 430 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 PTPROQ16827 1216 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 SLC39A12Q504Y0 691 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 C12orf29Q8N999 325 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 EMILIN2Q9BXX0 1053 aa18.53■□□□□ 0.56
TUBB3-211ENST00000556536 WDR27A2RRH5 827 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 VNN2O95498 520 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 CPB1P15086 417 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 STAT1P42224 750 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 RAB33AQ14088 237 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 E4F1Q66K89 784 aaPredicted RBP18.52■□□□□ 0.56
TUBB3-211ENST00000556536 RNF19BQ6ZMZ0 732 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 PALB2Q86YC2 1186 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 DCP1BQ8IZD4 617 aaKnown RBP18.52■□□□□ 0.56
TUBB3-211ENST00000556536 MYCBPAPQ8TBZ2 947 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 IQCDQ96DY2 449 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 TNIP3Q96KP6 325 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 HEXIM2Q96MH2 286 aaKnown RBP18.52■□□□□ 0.56
TUBB3-211ENST00000556536 PGLYRP2Q96PD5 576 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 ZSWIM1Q9BR11 485 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 FAM49BQ9NUQ9 324 aa18.52■□□□□ 0.56
TUBB3-211ENST00000556536 COL4A4P53420 1690 aaPredicted RBP18.52■□□□□ 0.56
TUBB3-211ENST00000556536 PER2O15055 1255 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 PAEPP09466 180 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 CCDC130P13994 396 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 CD19P15391 556 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 KLRC2P26717 231 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 ZBED6P86452 979 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 GPR17Q13304 367 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 TRIM14Q14142 442 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 RBM23Q86U06 439 aaKnown RBP18.51■□□□□ 0.55
TUBB3-211ENST00000556536 SLC47A2Q86VL8 602 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 DRC7Q8IY82 874 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 MYLPFQ96A32 169 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 C1QTNF1Q9BXJ1 281 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 B3GNT5Q9BYG0 378 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 MYO6Q9UM54 1294 aa18.51■□□□□ 0.55
TUBB3-211ENST00000556536 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
TUBB3-211ENST00000556536 CLDN5O00501 218 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
TUBB3-211ENST00000556536 ABLIM3O94929 683 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 ADH1AP07327 375 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
TUBB3-211ENST00000556536 ADKP55263 362 aaKnown RBP18.5■□□□□ 0.55
TUBB3-211ENST00000556536 ARID5AQ03989 594 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 SMYD5Q6GMV2 418 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 PAQR9Q6ZVX9 377 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms