RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SNX12Q9UMY4 172 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TIMM13Q9Y5L4 95 aaPredicted RBP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TANC1Q9C0D5 1861 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TCRBV5S1A1TA0A578 114 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 I3L4J1 428 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 M0QZQ0 153 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 ATP2C2O75185 946 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 KIF4AO95239 1232 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TIMP1P01033 207 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PAX3P23760 479 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 GATMP50440 423 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 MAMLD1Q13495 774 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 STILQ15468 1287 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 KIAA0319Q5VV43 1072 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 UBE2Q1Q7Z7E8 422 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TTC30AQ86WT1 665 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 ERICH1Q86X53 443 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM86AQ8N2M4 240 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 MYRIPQ8NFW9 859 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 HASPINQ8TF76 798 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 CPXM1Q96SM3 734 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 FAM49BQ9NUQ9 324 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 TJP2Q9UDY2 1190 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 DNAJB4Q9UDY4 337 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 M0QYV0 167 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CYP11A1P05108 521 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 LHX1P48742 406 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 LIN9Q5TKA1 542 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 SYCE1Q8N0S2 351 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 B3GALNT2Q8NCR0 500 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 BTBD6Q96KE9 485 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 DDX43Q9NXZ2 648 aaKnown RBP11.47□□□□□ -0.57
LINC01550-206ENST00000556462 HYOU1Q9Y4L1 999 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 ALG6Q9Y672 507 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 ZNF185O15231 689 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CALB1P05937 261 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CCDC130P13994 396 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PTPN1P18031 435 aaKnown RBP11.47□□□□□ -0.57
LINC01550-206ENST00000556462 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
LINC01550-206ENST00000556462 ACAT1P24752 427 aaKnown RBP11.47□□□□□ -0.57
LINC01550-206ENST00000556462 RFC2P35250 354 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 GABRB2P47870 512 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 TERF1P54274 439 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 RNASELQ05823 741 aaKnown RBP11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PDCLQ13371 301 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 IKBKEQ14164 716 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PTPROQ16827 1216 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 GOLGA7BQ2TAP0 167 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 C11orf63Q6NUN7 778 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PEX26Q7Z412 305 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 NPAS4Q8IUM7 802 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 ABI1Q8IZP0 508 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 LRRN4CLQ8ND94 238 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 SLC35F5Q8WV83 523 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 SUSD3Q96L08 255 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 OSBPL9Q96SU4 736 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 RTP3Q9BQQ7 232 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
LINC01550-206ENST00000556462 TULP2O00295 520 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
LINC01550-206ENST00000556462 ODC1P11926 461 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 CSF2RAP15509 400 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 CXCR5P32302 372 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 OR1G1P47890 313 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PSMC1P62191 440 aaKnown RBP11.46□□□□□ -0.57
LINC01550-206ENST00000556462 MESDQ14696 234 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PPP1R15BQ5SWA1 713 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 CYP4A22Q5TCH4 519 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PAQR9Q6ZVX9 377 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 CREG2Q8IUH2 290 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 ANKRD52Q8NB46 1076 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 COG1Q8WTW3 980 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 C18orf8Q96DM3 657 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 HES6Q96HZ4 224 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PSMB7Q99436 277 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
LINC01550-206ENST00000556462 PARVAQ9NVD7 372 aa11.46□□□□□ -0.57
LINC01550-206ENST00000556462 HOXA2O43364 376 aa11.45□□□□□ -0.58
LINC01550-206ENST00000556462 GJB6O95452 261 aa11.45□□□□□ -0.58
LINC01550-206ENST00000556462 ERBB2P04626 1255 aa11.45□□□□□ -0.58
LINC01550-206ENST00000556462 TCP1P17987 556 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms