RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 DCP1BQ8IZD4 617 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 FAM200AQ8TCP9 573 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 SPPL2BQ8TCT7 592 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 C2orf15Q8WU43 125 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 MYLPFQ96A32 169 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 CCDC47Q96A33 483 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 EEF2KMTQ96G04 330 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 ASB16Q96NS5 453 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 LRRC3BQ96PB8 259 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 MMS19Q96T76 1030 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 SYT15Q9BQS2 421 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 SDCBP2Q9H190 292 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 DPEP3Q9H4B8 488 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 SMYD3Q9H7B4 428 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 SLC2A4RGQ9NR83 387 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 HSFX1Q9UBD0 423 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 PCDHB5Q9Y5E4 795 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 PCDHA5Q9Y5H7 936 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 KMT2EQ8IZD2 1858 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SHISA7A6NL88 538 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 CALUO43852 315 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 PHACTR2O75167 634 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ECI2O75521 394 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 NR2F2P24468 414 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 GNL1P36915 607 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 PRCPP42785 496 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 LHX1P48742 406 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 PMS1P54277 932 aaKnown RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 CYP4F8P98187 520 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 PPP3CAQ08209 521 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 TCF15Q12870 199 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 TRPC3Q13507 836 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 NCOA4Q13772 614 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 NFE2Q16621 373 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 WDR72Q3MJ13 1102 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ZACNQ401N2 412 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ISM2Q6H9L7 571 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 VITQ6UXI7 678 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 DPH6Q7L8W6 267 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 LEMD2Q8NC56 503 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SPATA20Q8TB22 786 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ZSCAN18Q8TBC5 510 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SPATA18Q8TC71 538 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 SMARCD2Q92925 531 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ELSPBP1Q96BH3 223 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 MFSD1Q9H3U5 465 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ARHGEF3Q9NR81 526 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 TMEM30AQ9NV96 361 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 WNT16Q9UBV4 365 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 MAN1B1Q9UKM7 699 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 CIZ1Q9ULV3 898 aaPredicted RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 R3HCC1Q9Y3T6 440 aaKnown RBP8.68□□□□□ -1.02
VTI1B-206ENST00000556461 ASB3Q9Y575 518 aa8.68□□□□□ -1.02
VTI1B-206ENST00000556461 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 TRIM49BA6NDI0 452 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 SLC38A8A6NNN8 435 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 HEPACAM2A8MVW5 462 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 TACC1O75410 805 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 TADA3O75528 432 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 PRAMEF12O95522 483 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 STAU1O95793 577 aaKnown RBP8.67□□□□□ -1.02
VTI1B-206ENST00000556461 HLA-DRAP01903 254 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 F11P03951 625 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 F5P12259 2224 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
VTI1B-206ENST00000556461 AOC1P19801 751 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 BMP6P22004 513 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 BDNFP23560 247 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 PCSK1P29120 753 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ATICP31939 592 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 PLA2G5P39877 138 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 GCLMP48507 274 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 VAMP7P51809 220 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 CACNA2D1P54289 1103 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 TNNC1P63316 161 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 SMARCB1Q12824 385 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ORC1Q13415 861 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ADAM9Q13443 819 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 VEPH1Q14D04 833 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ZNF699Q32M78 642 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 MDH1BQ5I0G3 518 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 GPR158Q5T848 1215 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ZNF658Q5TYW1 1059 aaPredicted RBP8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ANKRD40Q6AI12 368 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ITIH5Q86UX2 942 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 SPATA2LQ8IUW3 424 aaPredicted RBP8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ARID3BQ8IVW6 561 aaPredicted RBP8.67□□□□□ -1.02
VTI1B-206ENST00000556461 FAM186BQ8IYM0 893 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 ADSSL1Q8N142 457 aa8.67□□□□□ -1.02
VTI1B-206ENST00000556461 OR6B3Q8NGW1 331 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms