RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 FDX1P10109 184 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 PPM1FP49593 454 aaPredicted RBP15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 RGS7P49802 495 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMCO4Q5TGY1 634 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 CIAPIN1Q6FI81 312 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 SULF1Q8IWU6 871 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 RTKN2Q8IZC4 609 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 HAUS8Q9BT25 410 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 LRRC19Q9H756 370 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 PCDH9Q9HC56 1237 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 A1CFQ9NQ94 594 aaKnown RBP15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 IRAK4Q9NWZ3 460 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 CYP39A1Q9NYL5 469 aa15.71■□□□□ 0.1
ARHGEF40-207ENST00000556399 NEMP1O14524 444 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 TGFB1I1O43294 461 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 SPATA31C1P0DKV0 1188 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 GARTP22102 1010 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 PHKA2P46019 1235 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ACCSLQ4AC99 568 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZCCHC9Q8N567 271 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 CATSPER1Q8NEC5 780 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 INPP5DQ92835 1189 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 PYGBP11216 843 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 STIP1P31948 543 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 MTMR2Q13614 643 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 TBCCQ15814 346 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 TRIM67Q6ZTA4 783 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 HACE1Q8IYU2 909 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 LPAR1Q92633 364 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 SHISA4Q96DD7 197 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 PGBD4Q96DM1 585 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 STARD13Q9Y3M8 1113 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 AFF2P51816 1311 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 SSTR1P30872 391 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 STAT5BP51692 787 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 COPAP53621 1224 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 CYTH1Q15438 398 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 BMT2Q1RMZ1 405 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 KLC3Q6P597 504 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 MCF2P10911 925 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 RPA3P35244 121 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ARMCX2Q7L311 632 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ABRAQ8N0Z2 381 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 ACTL9Q8TC94 416 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 FAM151AQ8WW52 585 aa15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 AVENQ9NQS1 362 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-207ENST00000556399 E2F8A0AVK6 867 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 AIM2O14862 343 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 CYP1A2P05177 515 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ICAM1P05362 532 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 AQP5P55064 265 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ACTR2P61160 394 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 PWWP2AQ96N64 755 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 MRPL40Q9NQ50 206 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 HOXC10Q9NYD6 342 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZNF70Q9UC06 446 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 LRCH1Q9Y2L9 728 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 TAC1P20366 129 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ADRA1DP25100 572 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC34A1Q06495 639 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 KIF19Q2TAC6 998 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 IZUMO2Q6UXV1 221 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 FRMD8P1Q9BZ68 369 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 IKZF4Q9H2S9 585 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 M0QZ92 97 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 CACNA2D1P54289 1103 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ARL13BQ3SXY8 428 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 LMO7Q8WWI1 1683 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 GCNT1Q02742 428 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 MFSD7Q6UXD7 560 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 RSPH3Q86UC2 560 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 RYBPQ8N488 228 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 TTLL6Q8N841 843 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ETNPPLQ8TBG4 499 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 WRNIP1Q96S55 665 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ACTL7BQ9Y614 415 aa15.69■□□□□ 0.1
ARHGEF40-207ENST00000556399 ENO3P13929 434 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 SERPINB3P29508 390 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 SOX10P56693 466 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 PPATQ06203 517 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 RSBN1LQ6PCB5 846 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 POTEAQ6S8J7 498 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 RDM1Q8NG50 284 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 MAGEC3Q8TD91 643 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 FRMD8Q9BZ67 464 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZSCAN5DPP0CG00 497 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 ADORA2BP29275 332 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TTC39CQ8N584 583 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms