RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 LOC730098B7Z3J9 87 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 PMM2O15305 246 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 HCRTO43612 131 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 PHACTR2O75167 634 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 LRRN2O75325 713 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ASS1P00966 412 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 LMO2P25791 158 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ERCC5P28715 1186 aaPredicted RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 LHX1P48742 406 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 MARSP56192 900 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 ADCY1Q08828 1119 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 BIRC3Q13489 604 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 CBX2Q14781 532 aaPredicted RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 PPM1LQ5SGD2 360 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 LIN9Q5TKA1 542 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 FAM171BQ6P995 826 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ELMSAN1Q6PJG2 1045 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 CCDC149Q6ZUS6 474 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ADHFE1Q8IWW8 467 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 THEM5Q8N1Q8 247 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 ATAD1Q8NBU5 361 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 SLC7A14Q8TBB6 771 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 TAF4BQ92750 862 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 SYAP1Q96A49 352 aaPredicted RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 UHRF1Q96T88 793 aaPredicted RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 MRPL45Q9BRJ2 306 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 PHF7Q9BWX1 381 aaPredicted RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 SRRTQ9BXP5 876 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 SDCBP2Q9H190 292 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 POMKQ9H5K3 350 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 APOBEC3GQ9HC16 384 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 METTL14Q9HCE5 456 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 DDX43Q9NXZ2 648 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 POLIQ9UNA4 740 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 COQ4Q9Y3A0 265 aa10.34□□□□□ -0.75
SRP54-210ENST00000556380 R3HCC1Q9Y3T6 440 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 TCF20Q9UGU0 1960 aaKnown RBP10.34□□□□□ -0.75
SRP54-210ENST00000556380 MTCL1Q9Y4B5 1905 aaKnown RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 MYBPHLA2RUH7 354 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 MTMR11A4FU01 709 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CPB1P15086 417 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CDH8P55286 799 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 SMARCB1Q12824 385 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 DUSP4Q13115 394 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 ZNF699Q32M78 642 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CBWD6Q4V339 395 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 SLC39A12Q504Y0 691 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 INTS6LQ5JSJ4 861 aaKnown RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 CBWD3Q5JTY5 395 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CBWD5Q5RIA9 395 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 KRT39Q6A163 491 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 TTC9BQ8N6N2 239 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 SMG7Q92540 1137 aaKnown RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 PGLYRP2Q96PD5 576 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 MMS19Q96T76 1030 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 PI4K2AQ9BTU6 479 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 SMYD3Q9H7B4 428 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 WDR6Q9NNW5 1121 aaKnown RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 HSFX1Q9UBD0 423 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
SRP54-210ENST00000556380 INSL5Q9Y5Q6 135 aa10.33□□□□□ -0.76
SRP54-210ENST00000556380 CCL16O15467 120 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 STX10O60499 249 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 N4BP1O75113 896 aaKnown RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 ATP2C2O75185 946 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 GNA14O95837 355 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 ACAT1P24752 427 aaKnown RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 PCSK1P29120 753 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 ELF1P32519 619 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 GNL1P36915 607 aaPredicted RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 ASPAP45381 313 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 MXI1P50539 228 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 MYL7Q01449 175 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 CCDC142Q17RM4 750 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 SPOPLQ6IQ16 392 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 DCP1BQ8IZD4 617 aaKnown RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 GJD3Q8N144 294 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 C2orf15Q8WU43 125 aaKnown RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 FAXDC2Q96IV6 333 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 BCO2Q9BYV7 579 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 CRTAC1Q9NQ79 661 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 RAB20Q9NX57 234 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 CEP72Q9P209 647 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 DNMT3BQ9UBC3 853 aaKnown RBP10.32□□□□□ -0.76
SRP54-210ENST00000556380 GTF3C4Q9UKN8 822 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms