RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 C15orf39Q6ZRI6 1047 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 TTLL10Q6ZVT0 673 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 DDX53Q86TM3 631 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 FAM228AQ86W67 206 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ECHDC2Q86YB7 292 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 HNRNPLLQ8WVV9 542 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ATRIPQ8WXE1 791 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 RSPH1Q8WYR4 309 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 STAMQ92783 540 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SDF4Q9BRK5 362 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 RTKNQ9BST9 563 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 MRPL9Q9BYD2 267 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 TRIM55Q9BYV6 548 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ZBP1Q9H171 429 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 PSTPIP2Q9H939 334 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SFXN1Q9H9B4 322 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 TBC1D17Q9HA65 648 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 DLGAP2Q9P1A6 1054 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SUCOQ9UBS9 1254 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 STK39Q9UEW8 545 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 KCNH3Q9ULD8 1083 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 CA14Q9ULX7 337 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 MYO15AQ9UKN7 3530 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 EP300Q09472 2414 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 DCHS1Q96JQ0 3298 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 RALGAPA2Q2PPJ7 1873 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 IGKV6D-21A0A0A0MT36 114 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 A0A0U1RQF3 1178 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 ERICH2A1L162 156 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 ETV2O00321 342 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 IFIT3O14879 490 aaKnown RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 GPR32O75388 356 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 ADRB1P08588 477 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 KLRC2P26717 231 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 TPP2P29144 1249 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 METAP2P50579 478 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 HK2P52789 917 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 TRDNQ13061 729 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 PTPN14Q15678 1187 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 KIZQ2M2Z5 673 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 CLLU1OSQ5K130 101 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 LARP1BQ659C4 914 aaKnown RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 DCLRE1AQ6PJP8 1040 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 ATG14Q6ZNE5 492 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 CATIPQ7Z7H3 387 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 CREG2Q8IUH2 290 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 RNF169Q8NCN4 708 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 CMASQ8NFW8 434 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 RSAD2Q8WXG1 361 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 PIBF1Q8WXW3 757 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 AUTS2Q8WXX7 1259 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 RILPL2Q969X0 211 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 RRP36Q96EU6 259 aaKnown RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 IGSF21Q96ID5 467 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 KLHL5Q96PQ7 755 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 MXRA8Q9BRK3 442 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 LZTS2Q9BRK4 669 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 RHOBTB2Q9BYZ6 727 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 TRIT1Q9H3H1 467 aaKnown RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 WDR6Q9NNW5 1121 aaKnown RBP5.46□□□□□ -1.54
ATXN3-239ENST00000556315 KCNH7Q9NS40 1196 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 EPS15L1Q9UBC2 864 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 FBXO4Q9UKT5 387 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHA6Q9UN73 950 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHA8Q9Y5H6 950 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 NFASCO94856 1347 aa5.46□□□□□ -1.54
ATXN3-239ENST00000556315 COL1A2P08123 1366 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 HIP1O00291 1037 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 MAGEB2O15479 319 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 KLF4O43474 513 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 LAMTOR5O43504 91 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 TBC1D4O60343 1298 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 ALDH2P05091 517 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 GALTP07902 379 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 TMOD1P28289 359 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 GNAQP50148 359 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 CLCN4P51793 760 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 STARD6P59095 220 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 RAB33AQ14088 237 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 NCAPHQ15003 741 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 WTAPQ15007 396 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 MIS18BP1Q6P0N0 1132 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 VHLLQ6RSH7 139 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 CWC27Q6UX04 472 aaKnown RBP5.45□□□□□ -1.54
ATXN3-239ENST00000556315 ABHD15Q6UXT9 468 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 MAML2Q8IZL2 1156 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-239ENST00000556315 METTL13Q8N6R0 699 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 MAP3K14Q99558 947 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SPZ1Q9BXG8 430 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 OSBPL6Q9BZF3 934 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms