RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 RAP1GAPP47736 663 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 NLRP12P59046 1061 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 TSPY1Q01534 308 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 SF3A2Q15428 464 aaKnown RBP16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 WSCD1Q658N2 575 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 FSTL4Q6MZW2 842 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 MAB21L3Q8N8X9 362 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 MRPS31Q92665 395 aaKnown RBP16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 EBF3Q9H4W6 596 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 TDP1Q9NUW8 608 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 AGO2Q9UKV8 859 aaKnown RBP16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 PCDHGA5Q9Y5G8 931 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 EML5Q05BV3 1969 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 ASPMQ8IZT6 3477 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 KPNA7A9QM74 516 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 IL18RAPO95256 599 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 CSH1P0DML2 217 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 CSH2P0DML3 217 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 DRD1P21728 446 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 PNPLA4P41247 253 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 PXNP49023 591 aaPredicted RBP16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 CDR1P51861 262 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 MCM6Q14566 821 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 PDGFRLQ15198 375 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 NFE2Q16621 373 aaPredicted RBP16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 PKN3Q6P5Z2 889 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 KBTBD6Q86V97 674 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 LRRTM3Q86VH5 581 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 RAD54LQ92698 747 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 KIF2CQ99661 725 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 HPS4Q9NQG7 708 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 STYXL1Q9Y6J8 313 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 IGF2RP11717 2491 aa16.65■□□□□ 0.26
SUPT16H-205ENST00000556217 ANKRD63C9JTQ0 380 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 RNF40O75150 1001 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 BMP15O95972 392 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 F11P03951 625 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 PLCG1P19174 1290 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 HOXC13P31276 330 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 LONP1P36776 959 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 ZNF268Q14587 947 aaPredicted RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 POSTNQ15063 836 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 FBXO43Q4G163 708 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 TRIM68Q6AZZ1 485 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 TMEM150AQ86TG1 271 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 MON1AQ86VX9 555 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 CPA6Q8N4T0 437 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 ZC3H10Q96K80 434 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 UXTQ9UBK9 157 aaPredicted RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 ZMIZ1Q9ULJ6 1067 aa16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 MAGED2Q9UNF1 606 aaPredicted RBP16.64■□□□□ 0.25
SUPT16H-205ENST00000556217 EGFP01133 1207 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 CCDC6Q16204 474 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 STPG1Q5TH74 334 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 TXNDC8Q6A555 127 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 POMGNT1Q8WZA1 660 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 HVCN1Q96D96 273 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 P2RY13Q9BPV8 354 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 ABCB6Q9NP58 842 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 VPS45Q9NRW7 570 aa16.63■□□□□ 0.25
SUPT16H-205ENST00000556217 OTOL1A6NHN0 477 aaPredicted RBP16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 TISP43B9A030 160 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 ARSAP15289 507 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 GJB2P29033 226 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 MPLP40238 635 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 GALK1P51570 392 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 RABEP1Q15276 862 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 ELF2Q15723 593 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 PLA2G2CQ5R387 149 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 UNQ6494/PRO21346Q6UXR6 183 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 KDF1Q8NAX2 398 aaPredicted RBP16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 ACDQ96AP0 544 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 PI4K2AQ9BTU6 479 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 SPEGQ15772 3267 aa16.62■□□□□ 0.25
SUPT16H-205ENST00000556217 LAMA1P25391 3075 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 HUS1O60921 280 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 RHOBTB1O94844 696 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 KCNK5O95279 499 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 APBB3O95704 486 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 DDIT3P35638 169 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 MYL7Q01449 175 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms