RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TMEM8AQ9HCN3 771 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 C11orf16Q9NQ32 467 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.25■□□□□ 0.19
ACTN1-217ENST00000556203 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 BICDL2A1A5D9 508 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 P4HA1P13674 534 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 CEBPBP17676 345 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 CCR2P41597 374 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 RAP1GAPP47736 663 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 GPR15P49685 360 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 EPHA5P54756 1037 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 CDH8P55286 799 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 STX17P56962 302 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-217ENST00000556203 PAK1Q13153 545 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 VEPH1Q14D04 833 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-217ENST00000556203 TMEM31Q5JXX7 168 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 SPOPLQ6IQ16 392 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 TTI2Q6NXR4 508 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 DNAJB7Q7Z6W7 309 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-217ENST00000556203 ITIH5Q86UX2 942 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 SPATA2LQ8IUW3 424 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-217ENST00000556203 TAS1R2Q8TE23 839 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 GIPC2Q8TF65 315 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 TAF4BQ92750 862 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 PSMG2Q969U7 264 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 CEP63Q96MT8 703 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 DUSP9Q99956 384 aaKnown RBP16.24■□□□□ 0.19
ACTN1-217ENST00000556203 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 CRTAC1Q9NQ79 661 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 IGSF9Q9P2J2 1179 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 ASB3Q9Y575 518 aa16.24■□□□□ 0.19
ACTN1-217ENST00000556203 A8MXQ7 604 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 ANHXE9PGG2 379 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 NRG2O14511 850 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-217ENST00000556203 STX10O60499 249 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 GPR37L1O60883 481 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 MICAL2O94851 1124 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 ASS1P00966 412 aaKnown RBP16.23■□□□□ 0.19
ACTN1-217ENST00000556203 GJA1P17302 382 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 CYP2F1P24903 491 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 MXI1P50539 228 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 TDGQ13569 410 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 HTR4Q13639 388 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 KRT39Q6A163 491 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 TMC8Q8IU68 726 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 UBALD2Q8IYN6 164 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 GPR152Q8TDT2 470 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 MYLPFQ96A32 169 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 LRRC3Q9BY71 257 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 IMPG2Q9BZV3 1241 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 APOBEC3GQ9HC16 384 aaKnown RBP16.23■□□□□ 0.19
ACTN1-217ENST00000556203 ARMCX3Q9UH62 379 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-217ENST00000556203 NUMBLQ9Y6R0 609 aa16.23■□□□□ 0.19
ACTN1-217ENST00000556203 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 MOSPD3O75425 235 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 ASPAP45381 313 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 NOP14P78316 857 aaKnown RBP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 SIGLEC14Q08ET2 396 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 TAF12Q16514 161 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 CFAP221Q4G0U5 840 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 SDHAF4Q5VUM1 108 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 POTEHQ6S545 545 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 PARM1Q6UWI2 310 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 C4orf50Q6ZRC1 276 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 TRIM67Q6ZTA4 783 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 CCDC150Q8NCX0 1101 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 SHKBP1Q8TBC3 707 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 NXPE3Q969Y0 559 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 FUBP3Q96I24 572 aaKnown RBP eCLIP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 METTL14Q9HCE5 456 aaKnown RBP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 ZNF334Q9HCZ1 680 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 GDE1Q9NZC3 331 aa16.22■□□□□ 0.19
ACTN1-217ENST00000556203 MAGEC2Q9UBF1 373 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-217ENST00000556203 A0A1W2PRU2 124 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 M0R296 226 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 LRRN2O75325 713 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 PTPN1P18031 435 aaKnown RBP16.21■□□□□ 0.19
ACTN1-217ENST00000556203 RPL10AP62906 217 aaKnown RBP16.21■□□□□ 0.19
ACTN1-217ENST00000556203 TEAD2Q15562 447 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 DDR2Q16832 855 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 CCDC40Q4G0X9 1142 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 MTSS1LQ765P7 747 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 FRMD5Q7Z6J6 570 aa16.21■□□□□ 0.19
ACTN1-217ENST00000556203 SLC44A3Q8N4M1 653 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms