RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 CCDC149Q6ZUS6 474 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 ACOT1Q86TX2 421 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 CRYBG2Q8N1P7 616 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 ATAD1Q8NBU5 361 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 MYCBPAPQ8TBZ2 947 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 KAT5Q92993 513 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0.01
SNX6-206ENST00000556162 ERGIC2Q96RQ1 377 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 LSM14BQ9BX40 385 aaKnown RBP15.08■□□□□ 0.01
SNX6-206ENST00000556162 DPEP3Q9H4B8 488 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 SIX2Q9NPC8 291 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 CRTAC1Q9NQ79 661 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 PCDHB5Q9Y5E4 795 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 COL6A3P12111 3177 aa15.08■□□□□ 0
SNX6-206ENST00000556162 TSC2P49815 1807 aa15.08■□□□□ 0
SNX6-206ENST00000556162 MTMR11A4FU01 709 aa15.08■□□□□ 0
SNX6-206ENST00000556162 TEX33O43247 280 aa15.08■□□□□ 0
SNX6-206ENST00000556162 DUSP4Q13115 394 aa15.08■□□□□ 0
SNX6-206ENST00000556162 ORC1Q13415 861 aa15.08■□□□□ 0
SNX6-206ENST00000556162 NR1I3Q14994 352 aa15.08■□□□□ 0
SNX6-206ENST00000556162 MDH1BQ5I0G3 518 aa15.08■□□□□ 0
SNX6-206ENST00000556162 KLHDC7AQ5VTJ3 777 aa15.08■□□□□ 0
SNX6-206ENST00000556162 GJB7Q6PEY0 223 aa15.08■□□□□ 0
SNX6-206ENST00000556162 C4orf50Q6ZRC1 276 aa15.08■□□□□ 0
SNX6-206ENST00000556162 RTL10Q7L3V2 364 aa15.08■□□□□ 0
SNX6-206ENST00000556162 SPATA2LQ8IUW3 424 aaPredicted RBP15.08■□□□□ 0
SNX6-206ENST00000556162 TCEAL8Q8IYN2 117 aa15.08■□□□□ 0
SNX6-206ENST00000556162 SPPL2BQ8TCT7 592 aa15.08■□□□□ 0
SNX6-206ENST00000556162 WHAMMQ8TF30 809 aa15.08■□□□□ 0
SNX6-206ENST00000556162 HLA-CQ95604 372 aa15.08■□□□□ 0
SNX6-206ENST00000556162 KREMEN1Q96MU8 473 aa15.08■□□□□ 0
SNX6-206ENST00000556162 PKMYT1Q99640 499 aa15.08■□□□□ 0
SNX6-206ENST00000556162 PLCB1Q9NQ66 1216 aa15.08■□□□□ 0
SNX6-206ENST00000556162 TMLHEQ9NVH6 421 aa15.08■□□□□ 0
SNX6-206ENST00000556162 HMGXB4Q9UGU5 601 aa15.08■□□□□ 0
SNX6-206ENST00000556162 DNAJC12Q9UKB3 198 aa15.08■□□□□ 0
SNX6-206ENST00000556162 PCDHB4Q9Y5E5 795 aa15.08■□□□□ 0
SNX6-206ENST00000556162 SEC24AO95486 1093 aa15.07■□□□□ 0
SNX6-206ENST00000556162 C8AP07357 584 aa15.07■□□□□ 0
SNX6-206ENST00000556162 HOXB8P17481 243 aaPredicted RBP15.07■□□□□ 0
SNX6-206ENST00000556162 LTBRP36941 435 aa15.07■□□□□ 0
SNX6-206ENST00000556162 CDR1P51861 262 aa15.07■□□□□ 0
SNX6-206ENST00000556162 CYP27A1Q02318 531 aa15.07■□□□□ 0
SNX6-206ENST00000556162 ARHGAP44Q17R89 818 aa15.07■□□□□ 0
SNX6-206ENST00000556162 ANKRD54Q6NXT1 300 aa15.07■□□□□ 0
SNX6-206ENST00000556162 TMEM270Q6UE05 265 aa15.07■□□□□ 0
SNX6-206ENST00000556162 GAS2L3Q86XJ1 694 aa15.07■□□□□ 0
SNX6-206ENST00000556162 TMEM176AQ96HP8 235 aa15.07■□□□□ 0
SNX6-206ENST00000556162 HEXIM2Q96MH2 286 aaKnown RBP15.07■□□□□ 0
SNX6-206ENST00000556162 TWNKQ96RR1 684 aa15.07■□□□□ 0
SNX6-206ENST00000556162 ELOVL4Q9GZR5 314 aa15.07■□□□□ 0
SNX6-206ENST00000556162 RBSNQ9H1K0 784 aa15.07■□□□□ 0
SNX6-206ENST00000556162 FAM207AQ9NSI2 230 aaPredicted RBP15.07■□□□□ 0
SNX6-206ENST00000556162 ABI2Q9NYB9 513 aaPredicted RBP15.07■□□□□ 0
SNX6-206ENST00000556162 CLEC1BQ9P126 229 aa15.07■□□□□ 0
SNX6-206ENST00000556162 HSFX1Q9UBD0 423 aa15.07■□□□□ 0
SNX6-206ENST00000556162 COG5Q9UP83 839 aa15.07■□□□□ 0
SNX6-206ENST00000556162 SIK3Q9Y2K2 1263 aa15.07■□□□□ 0
SNX6-206ENST00000556162 SLC27A5Q9Y2P5 690 aa15.07■□□□□ 0
SNX6-206ENST00000556162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.06■□□□□ 0
SNX6-206ENST00000556162 TBX10O75333 385 aa15.06■□□□□ 0
SNX6-206ENST00000556162 TPM3P06753 285 aa15.06■□□□□ 0
SNX6-206ENST00000556162 ACO1P21399 889 aaKnown RBP15.06■□□□□ 0
SNX6-206ENST00000556162 RFX1P22670 979 aa15.06■□□□□ 0
SNX6-206ENST00000556162 TUFMP49411 452 aaKnown RBP15.06■□□□□ 0
SNX6-206ENST00000556162 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
SNX6-206ENST00000556162 PPM1LQ5SGD2 360 aa15.06■□□□□ 0
SNX6-206ENST00000556162 DPY19L2P1Q6NXN4 242 aa15.06■□□□□ 0
SNX6-206ENST00000556162 UBR7Q8N806 425 aa15.06■□□□□ 0
SNX6-206ENST00000556162 NEK11Q8NG66 645 aa15.06■□□□□ 0
SNX6-206ENST00000556162 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
SNX6-206ENST00000556162 MYLPFQ96A32 169 aa15.06■□□□□ 0
SNX6-206ENST00000556162 PCED1BQ96HM7 432 aa15.06■□□□□ 0
SNX6-206ENST00000556162 FUBP3Q96I24 572 aaKnown RBP eCLIP15.06■□□□□ 0
SNX6-206ENST00000556162 LPIN3Q9BQK8 851 aa15.06■□□□□ 0
SNX6-206ENST00000556162 UBE2ZQ9H832 354 aaPredicted RBP15.06■□□□□ 0
SNX6-206ENST00000556162 SFXN1Q9H9B4 322 aa15.06■□□□□ 0
SNX6-206ENST00000556162 IFNKQ9P0W0 207 aa15.06■□□□□ 0
SNX6-206ENST00000556162 ZMYND10O75800 440 aa15.06■□□□□ 0
SNX6-206ENST00000556162 VNN2O95498 520 aa15.06■□□□□ 0
SNX6-206ENST00000556162 UCHL3P15374 230 aa15.06■□□□□ 0
SNX6-206ENST00000556162 KCNA5P22460 613 aa15.06■□□□□ 0
SNX6-206ENST00000556162 KLK7P49862 253 aa15.06■□□□□ 0
SNX6-206ENST00000556162 RAD23BP54727 409 aa15.06■□□□□ 0
SNX6-206ENST00000556162 CCDC142Q17RM4 750 aa15.06■□□□□ 0
SNX6-206ENST00000556162 MGAT5BQ3V5L5 792 aa15.06■□□□□ 0
SNX6-206ENST00000556162 CFAP221Q4G0U5 840 aa15.06■□□□□ 0
SNX6-206ENST00000556162 IQCEQ6IPM2 695 aa15.06■□□□□ 0
SNX6-206ENST00000556162 C12orf29Q8N999 325 aa15.06■□□□□ 0
SNX6-206ENST00000556162 SLC4A11Q8NBS3 891 aa15.06■□□□□ 0
SNX6-206ENST00000556162 ABCB6Q9NP58 842 aa15.06■□□□□ 0
SNX6-206ENST00000556162 ZDHHC7Q9NXF8 308 aa15.06■□□□□ 0
SNX6-206ENST00000556162 CCDC195A0A1B0GUA6 201 aa15.05■□□□□ -0
SNX6-206ENST00000556162 A0A1W2PQC6 194 aa15.05■□□□□ -0
SNX6-206ENST00000556162 RFPL2O75678 378 aa15.05■□□□□ -0
SNX6-206ENST00000556162 LRG1P02750 347 aa15.05■□□□□ -0
SNX6-206ENST00000556162 KRT5P13647 590 aa15.05■□□□□ -0
SNX6-206ENST00000556162 ALDH1A3P47895 512 aa15.05■□□□□ -0
SNX6-206ENST00000556162 PLCB2Q00722 1185 aa15.05■□□□□ -0
SNX6-206ENST00000556162 RAPGEF1Q13905 1077 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms