RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 XPO7Q9UIA9 1087 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SUFUQ9UMX1 484 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ZNF609O15014 1411 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 VWA5AO00534 786 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 STX7O15400 261 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 MEFVO15553 781 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ARIH2O95376 493 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SREBF1P36956 1147 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 PLA2G4AP47712 749 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ALDH7A1P49419 539 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SKP1P63208 163 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ACAP1Q15027 740 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 CYP4A22Q5TCH4 519 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 EFCAB12Q6NXP0 572 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 C16orf87Q6PH81 154 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 CHSY1Q86X52 802 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 C4orf19Q8IY42 314 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 EPS8L2Q9H6S3 715 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 TBX20Q9UMR3 447 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 PLAGL2Q9UPG8 496 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 EIF3LQ9Y262 564 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 RBP1P09455 135 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 PYGMP11217 842 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 C16orf72Q14CZ0 275 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 FBXL16Q8N461 479 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 TFB1MQ8WVM0 346 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 GPR63Q9BZJ6 419 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 KLHL11Q9NVR0 708 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 STK39Q9UEW8 545 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 NMT2O60551 498 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 C4BPBP20851 252 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 GRK2P25098 689 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 CNTN1Q12860 1018 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 Q4G0T1 1027 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 CACHD1Q5VU97 1274 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 CCNI2Q6ZMN8 369 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 PLEKHH3Q7Z736 793 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
ACTN1-216ENST00000556083 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
ACTN1-216ENST00000556083 VPS26AO75436 327 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 S100A5P33763 92 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 POLE2P56282 527 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 NFIAQ12857 509 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 NAB1Q13506 487 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CUL2Q13617 745 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CUL3Q13618 768 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MPZL3Q6UWV2 235 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 SLC13A1Q9BZW2 595 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 ANLNQ9NQW6 1124 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MYMKA6NI61 221 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 TEX33O43247 280 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 RPSAP08865 295 aaKnown RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MAGEA4P43358 317 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 SESN2P58004 480 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 SCARF1Q14162 830 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 TAF2Q6P1X5 1199 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 JAMLQ86YT9 394 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 WDR49Q8IV35 697 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 UNC45BQ8IWX7 931 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 C1orf54Q8WWF1 131 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CINPQ9BW66 212 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MRPL9Q9BYD2 267 aaKnown RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 AMACRQ9UHK6 382 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MADDQ8WXG6 1647 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 ZC3H13Q5T200 1668 aaKnown RBP11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CRTAMO95727 393 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CCND1P24385 295 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 CAP2P40123 477 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 STARD8Q92502 1023 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 LRRC40Q9H9A6 602 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 RAD18Q9NS91 495 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 WHRNQ9P202 907 aa11.16□□□□□ -0.62
ACTN1-216ENST00000556083 MYO1CO00159 1063 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 PTK7Q13308 1070 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 KCNB2Q92953 911 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ABHD8Q96I13 439 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CAMKK2Q96RR4 588 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CGRRF1Q99675 332 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
ACTN1-216ENST00000556083 GGA3Q9NZ52 723 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 F5H5T6 163 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms