RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 HK3P52790 923 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 TUBA4AP68366 448 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 SP2Q02086 613 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 CEP78Q5JTW2 689 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 AARS2Q5JTZ9 985 aaKnown RBP5.24□□□□□ -1.57
SCFD1-217ENST00000555953 PRAMEF17Q5VTA0 474 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 MORN5Q5VZ52 161 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 ANKRD16Q6P6B7 361 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 DTX2Q86UW9 622 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 PPP1R3BQ86XI6 285 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 MIER2Q8N344 545 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCFD1-217ENST00000555953 FANCBQ8NB91 859 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 RGMAQ96B86 450 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 ZBTB9Q96C00 473 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 ZNF48Q96MX3 618 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-217ENST00000555953 BHMT2Q9H2M3 363 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 NRIP3Q9NQ35 241 aa5.24□□□□□ -1.57
SCFD1-217ENST00000555953 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-217ENST00000555953 KAT6AQ92794 2004 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 PPP6CO00743 305 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 AHSGP02765 367 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 GNAI2P04899 355 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 IL6RP08887 468 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-217ENST00000555953 CYP2D6P10635 497 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 CYP2C18P33260 490 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 PTGER1P34995 402 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 TREML2Q5T2D2 321 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 PRPF38AQ8NAV1 312 aaKnown RBP5.23□□□□□ -1.57
SCFD1-217ENST00000555953 FAM46DQ8NEK8 389 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 DDX17Q92841 729 aaKnown RBP5.23□□□□□ -1.57
SCFD1-217ENST00000555953 SLC46A1Q96NT5 459 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 FCRL4Q96PJ5 515 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 NELL2Q99435 816 aa5.23□□□□□ -1.57
SCFD1-217ENST00000555953 FEZ2Q9UHY8 353 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-217ENST00000555953 QSOX1O00391 747 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 DCLK1O15075 740 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 SLC16A6O15403 523 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 SLC16A3O15427 465 aaKnown RBP5.22□□□□□ -1.57
SCFD1-217ENST00000555953 PIM1P11309 404 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-217ENST00000555953 PDCP20941 246 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 EEFSECP57772 596 aaKnown RBP5.22□□□□□ -1.57
SCFD1-217ENST00000555953 EVA1CP58658 441 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 THEMIS2Q5TEJ8 643 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 SLC18B1Q6NT16 456 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 ZNF804AQ7Z570 1209 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 TTYH3Q9C0H2 523 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 HESX1Q9UBX0 185 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 SERTAD3Q9UJW9 196 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 ZNF521Q96K83 1311 aa5.22□□□□□ -1.57
SCFD1-217ENST00000555953 PRRT4C9JH25 899 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 MYO1FO00160 1098 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 TLR5O60602 858 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 MOSPD3O75425 235 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 FTLP02792 175 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-217ENST00000555953 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 TYRP14679 529 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 SFPQP23246 707 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCFD1-217ENST00000555953 MAP2K6P52564 334 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 CYP4F2P78329 520 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 AMPD3Q01432 767 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 PCID2Q5JVF3 399 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 ICE2Q659A1 982 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 SLC2A7Q6PXP3 512 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 WDR53Q7Z5U6 358 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-217ENST00000555953 PRR18Q8N4B5 295 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 MACROD1Q9BQ69 325 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 DUSP22Q9NRW4 184 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 LMBRD1Q9NUN5 540 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 PCDHA1Q9Y5I3 950 aa5.21□□□□□ -1.58
SCFD1-217ENST00000555953 ADAMTS3O15072 1205 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 DTNBO60941 627 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 DNAJB5O75953 348 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 BMP15O95972 392 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 TUBB4AP04350 444 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 ENGP17813 658 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 CCND1P24385 295 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 EXOSC9Q06265 439 aaKnown RBP5.2□□□□□ -1.58
SCFD1-217ENST00000555953 SLC9A4Q6AI14 798 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-217ENST00000555953 NAPRTQ6XQN6 538 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 USP45Q70EL2 814 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 DENND1AQ8TEH3 1009 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 SMAD5Q99717 465 aaKnown RBP5.2□□□□□ -1.58
SCFD1-217ENST00000555953 SH2B3Q9UQQ2 575 aa5.2□□□□□ -1.58
SCFD1-217ENST00000555953 TOP3BO95985 862 aaKnown RBP5.19□□□□□ -1.58
SCFD1-217ENST00000555953 FESP07332 822 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 LILRA4P59901 499 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 LONRF3Q496Y0 759 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 RNF187Q5TA31 235 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-217ENST00000555953 ARHGAP40Q5TG30 622 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 CHSY1Q86X52 802 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 PCSK9Q8NBP7 692 aaKnown RBP5.19□□□□□ -1.58
SCFD1-217ENST00000555953 ATG4AQ8WYN0 398 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 FSD1LQ9BXM9 530 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 PNPOQ9NVS9 261 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms