RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	PLPP4	Q5VZY2	271 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	PDE12	Q6L8Q7	609 aa	Known RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	LLGL2	Q6P1M3	1020 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	CCDC186	Q7Z3E2	898 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	IRF2BP2	Q7Z5L9	587 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	C3orf58	Q8NDZ4	430 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	CPLX3	Q8WVH0	158 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	KAT5	Q92993	513 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	SUSD3	Q96L08	255 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	SPAG5	Q96R06	1193 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	PRRX2	Q99811	253 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	PAAF1	Q9BRP4	392 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	PHF7	Q9BWX1	381 aa	Predicted RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	NLRC4	Q9NPP4	1024 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	ENTPD7	Q9NQZ7	604 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	NXF1	Q9UBU9	619 aa	Known RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	DNAJB4	Q9UDY4	337 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	LRRC53	A6NM62	1247 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	GABRD	O14764	452 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	TRAPPC3	O43617	180 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	TADA2A	O75478	443 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	FER	P16591	822 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	WARS	P23381	471 aa	Known RBP	12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	OR1G1	P47890	313 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SLC11A1	P49279	550 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	ZNF132	P52740	706 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	BPIFB4	P59827	614 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	RAPGEF1	Q13905	1077 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	DUSP6	Q16828	381 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	ARHGAP44	Q17R89	818 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SFMBT2	Q5VUG0	894 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	UNC93A	Q86WB7	457 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SLC39A11	Q8N1S5	342 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM86A	Q8N2M4	240 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SENP8	Q96LD8	212 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	TCF25	Q9BQ70	676 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SDCBP2	Q9H190	292 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	NGRN	Q9NPE2	291 aa	Known RBP	12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	CISH	Q9NSE2	258 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	ABHD10	Q9NUJ1	306 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	STK39	Q9UEW8	545 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	CDH22	Q9UJ99	828 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	DSE	Q9UL01	958 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	KIAA1257	Q9ULG3	409 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	POLI	Q9UNA4	740 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	SNX9	Q9Y5X1	595 aa		12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	BZW2	Q9Y6E2	419 aa	Known RBP	12.07	□□□□□ -0.48
RAD51B-222	ENST00000555907	ZDBF2	Q9HCK1	2354 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	HIDE1	A8MVS5	230 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CYB561D2	O14569	222 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	SYN3	O14994	580 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CILP	O75339	1184 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	KIF4A	O95239	1232 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	WEE2	P0C1S8	567 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	TYMP	P19971	482 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	IGFBP6	P24592	240 aa	Predicted RBP	12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CLCN1	P35523	988 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	LHX1	P48742	406 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CDH8	P55286	799 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ELAVL2	Q12926	359 aa	Known RBP	12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	HGSNAT	Q68CP4	663 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	WDR59	Q6PJI9	974 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	DSTYK	Q6XUX3	929 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ASCL5	Q7RTU5	278 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMC7	Q7Z402	723 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	LRRC8A	Q8IWT6	810 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	GPR65	Q8IYL9	337 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CRYBG2	Q8N1P7	616 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	APPL2	Q8NEU8	664 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	VN1R2	Q8NFZ6	395 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ELMO3	Q96BJ8	720 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ASIC4	Q96FT7	647 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM169	Q96HH4	297 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	MMS19	Q96T76	1030 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	CDCA3	Q99618	268 aa	Predicted RBP	12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ARID3A	Q99856	593 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	3e-13	■■■■■ 105.8
RAD51B-222	ENST00000555907	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	ADAM28	Q9UKQ2	775 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	PCDHB8	Q9UN66	801 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	L1RE1	Q9UN81	338 aa		12.06	□□□□□ -0.48
RAD51B-222	ENST00000555907	OAZ2	O95190	189 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	SERPING1	P05155	500 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	PAEP	P09466	180 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	FGFR3	P22607	806 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	ANXA13	P27216	316 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	GNL1	P36915	607 aa	Predicted RBP	12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	SMC1A	Q14683	1233 aa	Known RBP	12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	CBX2	Q14781	532 aa	Predicted RBP	12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	HS1BP3	Q53T59	392 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM173	Q86WV6	379 aa	Predicted RBP	12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMTC1	Q8IUR5	882 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	RNF168	Q8IYW5	571 aa	Predicted RBP	12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	PDCL2	Q8N4E4	241 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	CCDC112	Q8NEF3	446 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	WHAMM	Q8TF30	809 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	KBTBD7	Q8WVZ9	684 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	IGSF21	Q96ID5	467 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	MRPL45	Q9BRJ2	306 aa	Known RBP	12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms