RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CBWD1Q9BRT8 395 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 GANQ9H2C0 597 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 IKZF4Q9H2S9 585 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 RXFP3Q9NSD7 469 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 AIPL1Q9NZN9 384 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 GCNT4Q9P109 453 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 GPC6Q9Y625 555 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-204ENST00000555890 PTPRSQ13332 1948 aa7.34□□□□□ -1.23
SLIRP-204ENST00000555890 COL12A1Q99715 3063 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 CTAGE9A4FU28 777 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 LRRIQ4A6NIV6 560 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF233A6NK53 670 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ANKRD63C9JTQ0 380 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 HNRNPDLO14979 420 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 PMM2O15305 246 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ASAP2O43150 1006 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 URI1O94763 535 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 SLU7O95391 586 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 LCA5LO95447 670 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 SNAI1O95863 264 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 LDHAP00338 332 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ASGR1P07306 291 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 TRIM49P0CI25 452 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 TRIM49CP0CI26 452 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ACTN1P12814 892 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 UCHL3P15374 230 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 FERP16591 822 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 GLRA2P23416 452 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ANXA13P27216 316 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 GTF2H1P32780 548 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 KIF11P52732 1056 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 VAV2P52735 878 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 EFNA5P52803 228 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 CCL23P55773 120 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 KLHL30Q0D2K2 578 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 NNTQ13423 1086 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 TFDP1Q14186 410 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 PLCB4Q15147 1175 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 HSDL1Q3SXM5 330 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF569Q5MCW4 686 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 CCDC122Q5T0U0 273 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 C10orf76Q5T2E6 689 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 IQSEC1Q6DN90 963 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 TAPT1Q6NXT6 567 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 LIAT1Q6ZQX7 453 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ZBTB8OSQ8IWT0 167 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 GPD1LQ8N335 351 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 PSPC1Q8WXF1 523 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 EMID1Q96A84 441 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 STK33Q9BYT3 514 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 IFIH1Q9BYX4 1025 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 INTS2Q9H0H0 1204 aaKnown RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 OSBPL2Q9H1P3 480 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 C2orf40Q9H1Z8 148 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 L2HGDHQ9H9P8 463 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 PDGFCQ9NRA1 345 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ERAP1Q9NZ08 941 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ARHGAP20Q9P2F6 1191 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 ARHGAP28Q9P2N2 729 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 FOXD3Q9UJU5 478 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-204ENST00000555890 DNAJC12Q9UKB3 198 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 GUCA1BQ9UMX6 200 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 PCDHA13Q9Y5I0 950 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 NF1P21359 2839 aa7.33□□□□□ -1.24
SLIRP-204ENST00000555890 EVPLQ92817 2033 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 GOLGA8IPA6NC78 632 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 GOLGA8JA6NMD2 632 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 TISP43B9A030 160 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MAGEB2O15479 319 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 EXTL3O43909 919 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PPFIA4O75335 1185 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 GFPT2O94808 682 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PIGRP01833 764 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 USP17L7P0C7H9 530 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 AKR1A1P14550 325 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ATF4P18848 351 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 TGM1P22735 817 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MARK3P27448 753 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ARHGAP25P42331 645 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MXI1P50539 228 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 NKX3-2P78367 333 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ARHGAP1Q07960 439 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PAK2Q13177 524 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 SNRNP35Q16560 246 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 TIGD5Q53EQ6 642 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 IQCEQ6IPM2 695 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 SDE2Q6IQ49 451 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ZPBP2Q6X784 338 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 UBALD2Q8IYN6 164 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MNS1Q8NEH6 495 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms