RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ALDH3A1P30838 453 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 POLR2BP30876 1174 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 PHBP35232 272 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ARL2P36404 184 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF132P52740 706 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 VCPP55072 806 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 WNT7BP56706 349 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 NCALDP61601 193 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 RPL7AP62424 266 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 LACTBP83111 547 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 KCNC4Q03721 635 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ADCY1Q08828 1119 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CCDC15Q0P6D6 951 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GRM1Q13255 1194 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TRPC3Q13507 836 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 SPARCL1Q14515 664 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 SURF1Q15526 300 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GALNTL6Q49A17 601 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 RNF43Q68DV7 783 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZPBP2Q6X784 338 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 PCGF5Q86SE9 256 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TDRPQ86YL5 185 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CYP4X1Q8N118 509 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GPATCH11Q8N954 259 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 REPS2Q8NFH8 660 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 OR5B17Q8NGF7 314 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZBTB45Q96K62 511 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 PWWP2AQ96N64 755 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 RAB3IPQ96QF0 476 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 WRNIP1Q96S55 665 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 MRPL4Q9BYD3 311 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 NIF3L1Q9GZT8 377 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TRABDQ9H4I3 376 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 HOXC10Q9NYD6 342 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 DNPEPQ9ULA0 475 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 AGTPBP1Q9UPW5 1226 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF541Q9H0D2 1346 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 LTBP3Q9NS15 1303 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 FOXO6A8MYZ6 492 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 POC1B-GALNT4F8VUJ3 575 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
TDP1-213ENST00000555880 PRPF4O43172 522 aaKnown RBP eCLIP7.37□□□□□ -1.23
TDP1-213ENST00000555880 ADCY3O60266 1144 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ATP5HO75947 161 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 KRT7P08729 469 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 CETPP11597 493 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 PECAM1P16284 738 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 PTPRAP18433 802 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 SKIV2L2P42285 1042 aaKnown RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 GMPSP49915 693 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 SLC18A1P54219 525 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ATP11AP98196 1134 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 BNIP1Q12981 228 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ACVR2BQ13705 512 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 MPP2Q14168 576 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 TMEM132BQ14DG7 1078 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 E2F5Q15329 346 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 SEPT7Q16181 437 aaKnown RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 HIF1AQ16665 826 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 SGSM1Q2NKQ1 1148 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ZBTB41Q5SVQ8 909 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 HHATQ5VTY9 493 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 SMYD5Q6GMV2 418 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 MFSD7Q6UXD7 560 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 POLNQ7Z5Q5 900 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ANKS1BQ7Z6G8 1248 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 TRABD2AQ86V40 505 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ERICH1Q86X53 443 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 BRSK2Q8IWQ3 736 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ZBED8Q8IZ13 594 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 TTC13Q8NBP0 860 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 DNERQ8NFT8 737 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 LRRC8CQ8TDW0 803 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 NKD2Q969F2 451 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 TBC1D31Q96DN5 1066 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 C12orf42Q96LP6 360 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 NIFKQ9BYG3 293 aaKnown RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 FRMD8P1Q9BZ68 369 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 FHDC1Q9C0D6 1143 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 HAPLN2Q9GZV7 340 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 PCDH9Q9HC56 1237 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 PSMC3IPQ9P2W1 217 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 PRKAG3Q9UGI9 489 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 SLC24A2Q9UI40 661 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 GGT7Q9UJ14 662 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 HACL1Q9UJ83 578 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ADAMTS5Q9UNA0 930 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 AGAP1Q9UPQ3 857 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.37□□□□□ -1.23
TDP1-213ENST00000555880 STARD13Q9Y3M8 1113 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 IVNS1ABPQ9Y6Y0 642 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 ADGRA2Q96PE1 1338 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 CNTNAP2Q9UHC6 1331 aa7.37□□□□□ -1.23
TDP1-213ENST00000555880 GOLGB1Q14789 3259 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 MED7O43513 233 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms