RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MFSD6LQ8IWD5 586 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 GOLGA5Q8TBA6 731 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 MMS19Q96T76 1030 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 GTF3C4Q9UKN8 822 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 MAGED2Q9UNF1 606 aaPredicted RBP26.23■■□□□ 1.79
PRKCH-216ENST00000555542 TICRRQ7Z2Z1 1910 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 NBL1P41271 181 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 PSMD2Q13200 908 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 DPH6Q7L8W6 267 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 FRMD5Q7Z6J6 570 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 OSTM1Q86WC4 334 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 NELL2Q99435 816 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 SCAND2PQ9GZW5 306 aaPredicted RBP26.22■■□□□ 1.79
PRKCH-216ENST00000555542 DLGAP2Q9P1A6 1054 aa26.22■■□□□ 1.79
PRKCH-216ENST00000555542 MTF2Q9Y483 593 aaPredicted RBP26.22■■□□□ 1.79
PRKCH-216ENST00000555542 NCAM2O15394 837 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 KLRC4O43908 158 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 GPR15P49685 360 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 RPL10AP62906 217 aaKnown RBP26.21■■□□□ 1.79
PRKCH-216ENST00000555542 TRPC3Q13507 836 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 C1orf210Q8IVY1 113 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 C12orf56Q8IXR9 622 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 CSGALNACT1Q8TDX6 532 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 CCDC47Q96A33 483 aaKnown RBP26.21■■□□□ 1.79
PRKCH-216ENST00000555542 OSBPL6Q9BZF3 934 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 TASP1Q9H6P5 420 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 ABCB6Q9NP58 842 aa26.21■■□□□ 1.79
PRKCH-216ENST00000555542 SPATA6Q9NWH7 488 aaPredicted RBP26.21■■□□□ 1.79
PRKCH-216ENST00000555542 NUP210Q8TEM1 1887 aaPredicted RBP26.21■■□□□ 1.79
PRKCH-216ENST00000555542 MAN2B1O00754 1011 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 GABRDO14764 452 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 HCRTO43612 131 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 PHACTR2O75167 634 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 MYL1P05976 194 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 GLULP15104 373 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 CYP2F1P24903 491 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 STK4Q13043 487 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 BECN1Q14457 450 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 KIAA0895Q8NCT3 520 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 NDRG2Q9UN36 371 aaKnown RBP26.2■■□□□ 1.78
PRKCH-216ENST00000555542 HPSEQ9Y251 543 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 PIEZO1Q92508 2521 aa26.2■■□□□ 1.78
PRKCH-216ENST00000555542 NCANO14594 1321 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 CACNA1HO95180 2353 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 PROB1E7EW31 1015 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 CSH1P0DML2 217 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 CSH2P0DML3 217 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 TARSP26639 723 aaKnown RBP26.19■■□□□ 1.78
PRKCH-216ENST00000555542 NDUFA8P51970 172 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 PSMC1P62191 440 aaKnown RBP26.19■■□□□ 1.78
PRKCH-216ENST00000555542 TNNC1P63316 161 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 DDR2Q16832 855 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 SDHAF4Q5VUM1 108 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 C4orf50Q6ZRC1 276 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 STKLD1Q8NE28 680 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 NKD2Q969F2 451 aaPredicted RBP26.19■■□□□ 1.78
PRKCH-216ENST00000555542 RSPRY1Q96DX4 576 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 SYT15Q9BQS2 421 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 IL21Q9HBE4 155 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 TRPV5Q9NQA5 729 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 PIAS3Q9Y6X2 628 aa26.19■■□□□ 1.78
PRKCH-216ENST00000555542 RPN1P04843 607 aaKnown RBP26.18■■□□□ 1.78
PRKCH-216ENST00000555542 MAGEA9P43362 315 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 BIRC3Q13489 604 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 SCN4BQ8IWT1 228 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 FSIP1Q8NA03 581 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 MKNK1Q9BUB5 465 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 SNX25Q9H3E2 840 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 CDH9Q9ULB4 789 aa26.18■■□□□ 1.78
PRKCH-216ENST00000555542 MYBPHLA2RUH7 354 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 CHADO15335 359 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 LAMTOR5O43504 91 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 CST3P01034 146 aaPredicted RBP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 PDGFRBP09619 1106 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 KPNA1P52294 538 aaPredicted RBP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 NLRP12P59046 1061 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 MAPRE1Q15691 268 aaKnown RBP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 CCDC142Q17RM4 750 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 WDR72Q3MJ13 1102 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 KBTBD7Q8WVZ9 684 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 FAM3CQ92520 227 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 FUBP3Q96I24 572 aaKnown RBP eCLIP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 PKMYT1Q99640 499 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 MAGEC2Q9UBF1 373 aaPredicted RBP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 UXTQ9UBK9 157 aaPredicted RBP26.17■■□□□ 1.78
PRKCH-216ENST00000555542 ZMYM5Q9UJ78 669 aa26.17■■□□□ 1.78
PRKCH-216ENST00000555542 ATP2C2O75185 946 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 KIF20AO95235 890 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 HMGA1P17096 107 aaKnown RBP26.16■■□□□ 1.78
PRKCH-216ENST00000555542 WARSP23381 471 aaKnown RBP26.16■■□□□ 1.78
PRKCH-216ENST00000555542 LMO2P25791 158 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 AVPR1AP37288 418 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 CASP4P49662 377 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 CYP27A1Q02318 531 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 FCHO2Q0JRZ9 810 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 CFAP221Q4G0U5 840 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 MAB21L3Q8N8X9 362 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 OR6B3Q8NGW1 331 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 MRPS31Q92665 395 aaKnown RBP26.16■■□□□ 1.78
PRKCH-216ENST00000555542 MYLPFQ96A32 169 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms