RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	FAM89A	Q96GI7	184 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	GDF15	Q99988	308 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	ISCA1	Q9BUE6	129 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	MAGEB5	Q9BZ81	275 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	MYLK2	Q9H1R3	596 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	TM7SF3	Q9NS93	570 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	SLC39A10	Q9ULF5	831 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	DGKB	Q9Y6T7	804 aa		5.21	□□□□□ -1.58
KTN1-222	ENST00000555506	CYR61	O00622	381 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PRSS23	O95084	383 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	A1BG	P04217	495 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	CYP2C9	P11712	490 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	XRCC6	P12956	609 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	IL1R2	P27930	398 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	VIPR2	P41587	438 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	CCT5	P48643	541 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	CHN2	P52757	468 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	WNT3	P56703	355 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	SLFN5	Q08AF3	891 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	GALNT1	Q10472	559 aa	Predicted RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	BIRC3	Q13489	604 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PFKFB4	Q16877	469 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	ZACN	Q401N2	412 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	USP39	Q53GS9	565 aa	Known RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	NOMO2	Q5JPE7	1267 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	RRAGB	Q5VZM2	374 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	GGT6	Q6P531	493 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	LDHAL6A	Q6ZMR3	332 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	SGMS1	Q86VZ5	419 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	MUL1	Q969V5	352 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	LTV1	Q96GA3	475 aa	Predicted RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PHACTR3	Q96KR7	559 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	MOGAT1	Q96PD6	335 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	HEPH	Q9BQS7	1158 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	TLR10	Q9BXR5	811 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	TBC1D23	Q9NUY8	699 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	HESX1	Q9UBX0	185 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	MID2	Q9UJV3	735 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	HDAC9	Q9UKV0	1011 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PCDHGB3	Q9Y5G1	929 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PODXL	O00592	558 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PPFIA4	O75335	1185 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	INMT	O95050	263 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	HK1	P19367	917 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	GCSH	P23434	173 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	HIBADH	P31937	336 aa	Known RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PIGF	Q07326	219 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	FBXO38	Q6PIJ6	1188 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	SYT12	Q8IV01	421 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	CACNA2D3	Q8IZS8	1091 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506		Q8N1X5	172 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	CCDC150	Q8NCX0	1101 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	IL17D	Q8TAD2	202 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	RAPGEF4	Q8WZA2	1011 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	TRIM63	Q969Q1	353 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	MIEF2	Q96C03	454 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	PPP1R9B	Q96SB3	815 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	RMDN3	Q96TC7	470 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	ZNF747	Q9BV97	191 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	REXO4	Q9GZR2	422 aa	Known RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	UBA5	Q9GZZ9	404 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	XPNPEP3	Q9NQH7	507 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	NECTIN3	Q9NQS3	549 aa		5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	MRPS18A	Q9NVS2	196 aa	Known RBP	5.2	□□□□□ -1.58
KTN1-222	ENST00000555506	LOC102723971	A0A1B0GUV8	181 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	FAM234B	A2RU67	622 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	CAPN14	A8MX76	684 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	POLRMT	O00411	1230 aa	Known RBP	5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	NPC1	O15118	1278 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	SH3BP5	O60239	455 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	FCER1A	P12319	257 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	BTF3	P20290	206 aa	Known RBP	5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	ACRV1	P26436	265 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	GABRB3	P28472	473 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	POU5F1B	Q06416	359 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	SLC29A2	Q14542	456 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	IQCB1	Q15051	598 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	NRN1L	Q496H8	165 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	CRIP3	Q6Q6R5	217 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	ZDHHC24	Q6UX98	284 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	RNF207	Q6ZRF8	634 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	KRT28	Q7Z3Y7	464 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	GAS2L3	Q86XJ1	694 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	CFAP52	Q8N1V2	620 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	MB21D1	Q8N884	522 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	GLIS1	Q8NBF1	620 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	ZNF384	Q8TF68	577 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	SMO	Q99835	787 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	MESP1	Q9BRJ9	268 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	DHX36	Q9H2U1	1008 aa	Known RBP	5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	ETAA1	Q9NY74	926 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506	CDYL	Q9Y232	598 aa		5.19	□□□□□ -1.58
KTN1-222	ENST00000555506		A0A087WZ62	844 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	LGALS16	A8MUM7	142 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	SYT5	O00445	386 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	CCP110	O43303	1012 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	VPS4B	O75351	444 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	NDST3	O95803	873 aa		5.18	□□□□□ -1.58

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