RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 C1orf228Q6PIY5 440 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 CENPUQ71F23 418 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 CCDC60Q8IWA6 550 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 JOSD2Q8TAC2 188 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 CCDC124Q96CT7 223 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 LRMDAQ9H2I8 198 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 RANBP17Q9H2T7 1088 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 EDN1P05305 212 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 ESRRAP11474 423 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 RFC1P35251 1148 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 NEK3P51956 506 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 ARFIP2P53365 341 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 ALDH18A1P54886 795 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 TFAMQ00059 246 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 TMEM132AQ24JP5 1023 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 SPOCD1Q6ZMY3 1216 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 SERAC1Q96JX3 654 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 MANSC1Q9H8J5 431 aa17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 SPATS2LQ9NUQ6 558 aaKnown RBP17.93■□□□□ 0.46
PPP4R3A-208ENST00000555462 COL5A3P25940 1745 aaPredicted RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 ZNF536O15090 1300 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 LPXNO60711 386 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 TBX10O75333 385 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 TMEM63AO94886 807 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 ETS2P15036 469 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 GNAZP19086 355 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 CUL2Q13617 745 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 BSPRYQ5W0U4 402 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MORC4Q8TE76 937 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 TEKT4Q8WW24 435 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 PGLYRP2Q96PD5 576 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MMP19Q99542 508 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 TSC22D3Q99576 134 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 TSSK1BQ9BXA7 367 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MTMR12Q9C0I1 747 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 GPATCH2LQ9NWQ4 482 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 PPARGC1AQ9UBK2 798 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 IKBKGQ9Y6K9 419 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 UBE4BO95155 1302 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 NVLO15381 856 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 STK10O94804 968 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 SORBS2O94875 1100 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MT-ND3P03897 115 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 SRGAP2CP0DJJ0 459 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 ALDH1B1P30837 517 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 YARSP54577 528 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MAP4K3Q8IVH8 894 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 LMNTD2Q8IXW0 634 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 POU5F2Q8N7G0 328 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 SENP7Q9BQF6 1050 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 WDR83Q9BRX9 315 aaKnown RBP17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 NMUR2Q9GZQ4 415 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 SLC17A6Q9P2U8 582 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 STARD13Q9Y3M8 1113 aa17.92■□□□□ 0.46
PPP4R3A-208ENST00000555462 P4HA2O15460 535 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 DCTN3O75935 186 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 GJB1P08034 283 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 TROVE2P10155 538 aaKnown RBP eCLIP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 IL1R2P27930 398 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 FSTL1Q12841 308 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 PGM5Q15124 567 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 KBTBD12Q3ZCT8 623 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 CDHR3Q6ZTQ4 885 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 PRPF39Q86UA1 669 aaKnown RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 RFX6Q8HWS3 928 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 THNSL1Q8IYQ7 743 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ABRAQ8N0Z2 381 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 AGR3Q8TD06 166 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 XPNPEP1Q9NQW7 623 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 PSMC3IPQ9P2W1 217 aaPredicted RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 LGALS13Q9UHV8 139 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 XPO7Q9UIA9 1087 aaKnown RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 HEY1Q9Y5J3 304 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ATRNL1Q5VV63 1379 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ATAD5Q96QE3 1844 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 PSMA2P25787 234 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 MYL6P60660 151 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 CFAP61Q8NHU2 1237 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 STMN2Q93045 179 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 CNKSR1Q969H4 720 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 RILPQ96NA2 401 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.91■□□□□ 0.462e-6■■■□□ 16.8
PPP4R3A-208ENST00000555462 IL1RAPL1Q9NZN1 696 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 KCND2Q9NZV8 630 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ZNF70Q9UC06 446 aaPredicted RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 STRCQ7RTU9 1775 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 LAMA3Q16787 3333 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 WDR64B1ANS9 1081 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 B2RBV5 119 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ATP2A1O14983 1001 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 TJP3O95049 919 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ELK3P41970 407 aa17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 ARID3BQ8IVW6 561 aaPredicted RBP17.91■□□□□ 0.46
PPP4R3A-208ENST00000555462 AGGF1Q8N302 714 aaeCLIP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms