RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DRICH1Q6PGQ1 229 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 EZH1Q92800 747 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PTCD3Q96EY7 689 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 NSL1Q96IY1 281 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 GBP5Q96PP8 586 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 RBM15Q96T37 977 aaKnown RBP eCLIP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF184Q99676 751 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 VPS11Q9H270 941 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 MYH9P35579 1960 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 ATP2A1O14983 1001 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 EXTL3O43909 919 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 KCNA2P16389 499 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 CA4P22748 312 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 RRM1P23921 792 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 KLRC2P26717 231 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 DSG3P32926 999 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 RAP1GDS1P52306 607 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 RNF220Q5VTB9 566 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 SV2AQ7L0J3 742 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 TAS1R2Q8TE23 839 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 DDX1Q92499 740 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF75CPQ92670 426 aaPredicted RBP11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 OLFM3Q96PB7 478 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 MIPEPQ99797 713 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 SH2D3AQ9BRG2 576 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 PSMC3IPQ9P2W1 217 aaPredicted RBP11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF112Q9UJU3 913 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-210ENST00000555252 DNALI1O14645 258 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CAPN9O14815 690 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 MAGEC1O60732 1142 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 PENKP01210 267 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ATP5BP06576 529 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 KRT15P19012 456 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 MAPK4P31152 587 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CETN2P41208 172 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CLDN10P78369 228 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SNX1Q13596 522 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 XKR3Q5GH77 459 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF280CQ8ND82 737 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 REPS2Q8NFH8 660 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 FAM81AQ8TBF8 368 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 MCUR1Q96AQ8 359 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 OSBPL8Q9BZF1 889 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 PIDD1Q9HB75 910 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SLCO1B3Q9NPD5 702 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SLC9A2Q9UBY0 812 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 GYG2O15488 501 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF862O60290 1169 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 POLE2P56282 527 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 PSMD6Q15008 389 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 MORF4L2Q15014 288 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 LRRC23Q53EV4 343 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ACSBG2Q5FVE4 666 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ABHD15Q6UXT9 468 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 TRIM72Q6ZMU5 477 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 C15orf39Q6ZRI6 1047 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 ZC3H18Q86VM9 953 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 STKLD1Q8NE28 680 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 B4GALNT2Q8NHY0 566 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 C9orf72Q96LT7 481 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 EPAS1Q99814 870 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CENPKQ9BS16 269 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 MIS12Q9H081 205 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 CYP26B1Q9NR63 512 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 COMMD3-BMI1R4GMX3 469 aa11.24□□□□□ -0.61
MTHFD1-210ENST00000555252 SPATA31C2B4DYI2 1134 aa11.23□□□□□ -0.61
MTHFD1-210ENST00000555252 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
MTHFD1-210ENST00000555252 SPAG7O75391 227 aa11.23□□□□□ -0.61
MTHFD1-210ENST00000555252 LDHAP00338 332 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-210ENST00000555252 KRT5P13647 590 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms