RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 CHAMP1Q96JM3 812 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 MAGED2Q9UNF1 606 aaPredicted RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 HUS1O60921 280 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 EPN2O95208 641 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 DRD1P21728 446 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 CDR1P51861 262 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 MYL7Q01449 175 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 ZNF268Q14587 947 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-207ENST00000555114 ZNF720Q7Z2F6 126 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 MON1AQ86VX9 555 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 TMEM86AQ8N2M4 240 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 CCDC26Q8TAB7 109 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-207ENST00000555114 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-207ENST00000555114 ARRDC1-AS1Q9H2J1 176 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 HPS4Q9NQG7 708 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 C2orf42Q9NWW7 574 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
NEDD1-207ENST00000555114 PCDHGA5Q9Y5G8 931 aa16.67■□□□□ 0.26
NEDD1-207ENST00000555114 TISP43B9A030 160 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 GDF9O60383 454 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 LDHAP00338 332 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 F11P03951 625 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 ZNF806P0C7X5 589 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 HMGA1P17096 107 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 GAP43P17677 238 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 TXLNAP40222 546 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 TFAMQ00059 246 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 ST3GAL2Q16842 350 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 TXNDC8Q6A555 127 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 TRIM68Q6AZZ1 485 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 FSTL4Q6MZW2 842 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 SFR1Q86XK3 245 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 EFCAB13Q8IY85 973 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 LRRC15Q8TF66 581 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 ACBD6Q9BR61 282 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 MRPL44Q9H9J2 332 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 DDX43Q9NXZ2 648 aaKnown RBP16.66■□□□□ 0.26
NEDD1-207ENST00000555114 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
NEDD1-207ENST00000555114 ACACBO00763 2458 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 RNF40O75150 1001 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
NEDD1-207ENST00000555114 PXNP49023 591 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-207ENST00000555114 FAM160A1Q05DH4 1040 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 CRELD2Q6UXH1 353 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-207ENST00000555114 DYMQ7RTS9 669 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 TMEM150AQ86TG1 271 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 LRRC52Q8N7C0 313 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 SPATA18Q8TC71 538 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 ACDQ96AP0 544 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 TRMT2BQ96GJ1 504 aaKnown RBP16.65■□□□□ 0.26
NEDD1-207ENST00000555114 P2RY13Q9BPV8 354 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 TMEM206Q9H813 350 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 ITGA11Q9UKX5 1188 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 SCN1AP35498 2009 aa16.65■□□□□ 0.26
NEDD1-207ENST00000555114 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 KRT37O76014 449 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 NOL4O94818 638 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 EGFP01133 1207 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 ITGB3P05106 788 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 USP17L7P0C7H9 530 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 PCSK1P29120 753 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 RAP1GAPP47736 663 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 IFNAR2P48551 515 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 GRIN1Q05586 938 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 NR1H3Q13133 447 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 ALCAMQ13740 583 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 MTF1Q14872 753 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 ELF2Q15723 593 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 C8orf34Q49A92 452 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
NEDD1-207ENST00000555114 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
NEDD1-207ENST00000555114 PKN3Q6P5Z2 889 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 SPATA2LQ8IUW3 424 aaPredicted RBP16.64■□□□□ 0.25
NEDD1-207ENST00000555114 BRSK2Q8IWQ3 736 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 SYCP3Q8IZU3 236 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 ATP2A3Q93084 1043 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 TRPC7Q9HCX4 862 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 VPS45Q9NRW7 570 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 DUS2Q9NX74 493 aaKnown RBP16.64■□□□□ 0.25
NEDD1-207ENST00000555114 RBAKQ9NYW8 714 aaPredicted RBP16.64■□□□□ 0.25
NEDD1-207ENST00000555114 ANGPTL2Q9UKU9 493 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms