RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 INTS2Q9H0H0 1204 aaKnown RBP12.86□□□□□ -0.35
ACTN1-214ENST00000555075 VPS16Q9H269 839 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 GTF3C4Q9UKN8 822 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 MTMR11A4FU01 709 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 RFPL2O75678 378 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 SERPINC1P01008 464 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
ACTN1-214ENST00000555075 GRIK1P39086 918 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 USP8P40818 1118 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 CDR1P51861 262 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 NDST1P52848 882 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 MFAP3P55082 362 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 SLC8A3P57103 927 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 TWF1Q12792 350 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 SCARA3Q6AZY7 606 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 ATAD1Q8NBU5 361 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 HEXIM2Q96MH2 286 aaKnown RBP12.85□□□□□ -0.35
ACTN1-214ENST00000555075 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 MED15Q96RN5 788 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
ACTN1-214ENST00000555075 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-214ENST00000555075 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 INSL5Q9Y5Q6 135 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
ACTN1-214ENST00000555075 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 GABRDO14764 452 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 PMM2O15305 246 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 MBTPS2O43462 519 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 KRT5P13647 590 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 CD19P15391 556 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 LMO2P25791 158 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 HOXA9P31269 272 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 LTBRP36941 435 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 ASPAP45381 313 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 CBX2Q14781 532 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-214ENST00000555075 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 KRT31Q15323 416 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 SYCE2Q6PIF2 218 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 RRAGAQ7L523 313 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 GPR149Q86SP6 731 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 SMRP1Q8NCR6 262 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-214ENST00000555075 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 TATDN2Q93075 761 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-214ENST00000555075 FUBP3Q96I24 572 aaKnown RBP eCLIP12.84□□□□□ -0.35
ACTN1-214ENST00000555075 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-214ENST00000555075 CISHQ9NSE2 258 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 NR2E1Q9Y466 385 aa12.84□□□□□ -0.35
ACTN1-214ENST00000555075 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 GTPBP10A4D1E9 387 aaKnown RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ZNF197O14709 1029 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ATP2C2O75185 946 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 SEC24AO95486 1093 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 PTPN2P17706 415 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 GBP2P32456 591 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 UBXN1Q04323 297 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ORC1Q13415 861 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 KCNC3Q14003 757 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 CDKAL1Q5VV42 579 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ENOSF1Q7L5Y1 443 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 RTP3Q9BQQ7 232 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 CORO1BQ9BR76 489 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ELOVL4Q9GZR5 314 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-214ENST00000555075 CBX8Q9HC52 389 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ASAH2Q9NR71 780 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 EHD2Q9NZN4 543 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
ACTN1-214ENST00000555075 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
ACTN1-214ENST00000555075 TRIM66O15016 1216 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms