RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 MICAL1Q8TDZ2 1067 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 PIGOQ8TEQ8 1089 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 SEPT8Q92599 483 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 TMEM143Q96AN5 459 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CDK5RAP3Q96JB5 506 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
ATXN3-231ENST00000554994 RAB34Q9BZG1 259 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 ZSWIM4Q9H7M6 989 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 TBC1D17Q9HA65 648 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CARS2Q9HA77 564 aaKnown RBP5.16□□□□□ -1.58
ATXN3-231ENST00000554994 POLD4Q9HCU8 107 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 SUCLA2Q9P2R7 463 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-231ENST00000554994 LRWD1Q9UFC0 647 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 GMEB2Q9UKD1 530 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CA14Q9ULX7 337 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CEP131Q9UPN4 1083 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 IGSF10Q6WRI0 2623 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 ADGRA3Q8IWK6 1321 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 CACNA1IQ9P0X4 2223 aa5.16□□□□□ -1.58
ATXN3-231ENST00000554994 MYH10P35580 1976 aa5.15□□□□□ -1.58
ATXN3-231ENST00000554994 ITPR1Q14643 2758 aa5.15□□□□□ -1.58
ATXN3-231ENST00000554994 IGKV6D-21A0A0A0MT36 114 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 SMIM35A0A1B0GVV1 85 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 DENND3A2RUS2 1198 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 EIF4E1BA6NMX2 242 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 STX6O43752 255 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 NUAK1O60285 661 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 CSDE1O75534 798 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RPS6KA5O75582 802 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 SLITRK3O94933 977 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PARNO95453 639 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PRB1P04280 392 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 FGFR4P22455 802 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 MARCKSP29966 332 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 CDC25AP30304 524 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 CD52P31358 61 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 YWHABP31946 246 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 TOB1P50616 345 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RBL2Q08999 1139 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PAK2Q13177 524 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PPP2R5CQ13362 524 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 CUL4AQ13619 759 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 BTG3Q14201 252 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RILPL1Q5EBL4 403 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 SPOUT1Q5T280 376 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 KRT79Q5XKE5 535 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 TAF2Q6P1X5 1199 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 KIAA0319LQ8IZA0 1049 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RDM1Q8NG50 284 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 FEZF2Q8TBJ5 459 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 ATRIPQ8WXE1 791 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 SNX21Q969T3 373 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RELTQ969Z4 430 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 ISL2Q96A47 359 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 C20orf173Q96LM9 149 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 NLRP4Q96MN2 994 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 MBOAT7Q96N66 472 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 LXNQ9BS40 222 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PANK2Q9BZ23 570 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 KCNMB3Q9NPA1 279 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 CYP26B1Q9NR63 512 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 ANKFY1Q9P2R3 1169 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 RWDD3Q9Y3V2 267 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 TRPV2Q9Y5S1 764 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 MRPL42Q9Y6G3 142 aaKnown RBP5.15□□□□□ -1.59
ATXN3-231ENST00000554994 PLXNA4Q9HCM2 1894 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 COL1A2P08123 1366 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 ZNF462Q96JM2 2506 aa5.15□□□□□ -1.59
ATXN3-231ENST00000554994 TEP1Q99973 2627 aaKnown RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 A0A087WZ62 844 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 ARHGEF35A5YM69 484 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 PP2D1A8MPX8 630 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 ENPP3O14638 875 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 GPR182O15218 404 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 FZD6O60353 706 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 USO1O60763 962 aaKnown RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 MED24O75448 989 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 KRT18P05783 430 aaKnown RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 GLULP15104 373 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 ZSCAN20P17040 1043 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 UBA7P41226 1012 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 TRAPPC10P48553 1259 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 CSTF1Q05048 431 aaKnown RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 RAD51AP2Q09MP3 1159 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 PDIA5Q14554 519 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 LPIN1Q14693 890 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 STK38Q15208 465 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 DUSP6Q16828 381 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 PAN2Q504Q3 1202 aaKnown RBP5.14□□□□□ -1.59
ATXN3-231ENST00000554994 PLEKHG4Q58EX7 1191 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 FAM102BQ5T8I3 360 aa5.14□□□□□ -1.59
ATXN3-231ENST00000554994 IL31Q6EBC2 164 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms