RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 MLF2Q15773 248 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 USH1GQ495M9 461 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 ARHGEF16Q5VV41 709 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 RASGRP2Q7LDG7 609 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NSUN6Q8TEA1 469 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 HNRNPLLQ8WVV9 542 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 CLEC4DQ8WXI8 215 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 AUTS2Q8WXX7 1259 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NELL1Q92832 810 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 DSCC1Q9BVC3 393 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 RANBP17Q9H2T7 1088 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 AGO3Q9H9G7 860 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF287Q9HBT7 754 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 GP6Q9HCN6 339 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 PRMT8Q9NR22 394 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 RXFP3Q9NSD7 469 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 SPG21Q9NZD8 308 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 SYNPO2Q9UMS6 1093 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 IGSF10Q6WRI0 2623 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NRCAMQ92823 1304 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 DENND3A2RUS2 1198 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 M0QZ92 97 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 PLA2G6O60733 806 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 DBHP09172 617 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 MYBP10242 640 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 FGFR1P11362 822 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 HOXC8P31273 242 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 LIMS1P48059 325 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 SARSP49591 514 aaKnown RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 GPC5P78333 572 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 MGAT3Q09327 533 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 MTAPQ13126 283 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 SRSF5Q13243 272 aaKnown RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 MTX1Q13505 466 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 VWA3BQ502W6 1294 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 SLC44A4Q53GD3 710 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 CELF3Q5SZQ8 465 aaKnown RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 UTP14CQ5TAP6 766 aaKnown RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 SYDE2Q5VT97 1194 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 KCNT2Q6UVM3 1135 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 DNAJB3Q8WWF6 145 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 BRF1Q92994 677 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 FCRL3Q96P31 734 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 TAAR1Q96RJ0 339 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 MYADMQ96S97 322 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 RMDN3Q96TC7 470 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 FAM49AQ9H0Q0 323 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 ARRDC1-AS1Q9H2J1 176 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 CWH43Q9H720 699 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 LTB4R2Q9NPC1 389 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 SLC2A4RGQ9NR83 387 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF215Q9UL58 517 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-226ENST00000554350 STX8Q9UNK0 236 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF451Q9Y4E5 1061 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 FHOD1Q9Y613 1164 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 NUMBLQ9Y6R0 609 aa6.48□□□□□ -1.37
ATXN3-226ENST00000554350 HECTD1Q9ULT8 2610 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 KIAA1217Q5T5P2 1943 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 SURF6O75683 361 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 MYCLP12524 364 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 TRIM27P14373 513 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 MRPS6P82932 125 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 ADCY1Q08828 1119 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 TROAPQ12815 778 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 NR1I3Q14994 352 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 TMEM266Q2M3C6 531 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 HLA-DQA1Q5Y7H0 255 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 TAF2Q6P1X5 1199 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 UNC5AQ6ZN44 842 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 GET4Q7L5D6 327 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 PROSER1Q86XN7 944 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 SMC5Q8IY18 1101 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 FTSJ3Q8IY81 847 aaKnown RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 VPS52Q8N1B4 723 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 RBBP8NLQ8NC74 664 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 FRAT1Q92837 279 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-226ENST00000554350 IWS1Q96ST2 819 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 TM9SF2Q99805 663 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 OSBPL6Q9BZF3 934 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 SMOC1Q9H4F8 434 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 ATP6V0A4Q9HBG4 840 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 ZBTB40Q9NUA8 1239 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 EPS15L1Q9UBC2 864 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 PADI3Q9ULW8 664 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 WASF3Q9UPY6 502 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 RAI2Q9Y5P3 530 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 SDK1Q7Z5N4 2213 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 CLUHO75153 1309 aa6.47□□□□□ -1.37
ATXN3-226ENST00000554350 C2orf16Q68DN1 1984 aa6.46□□□□□ -1.37
ATXN3-226ENST00000554350 J3QKU1 62 aa6.46□□□□□ -1.38
ATXN3-226ENST00000554350 CBFA2T2O43439 604 aa6.46□□□□□ -1.38
ATXN3-226ENST00000554350 CYBBP04839 570 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms