RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CD302Q8IX05 232 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 IFT20Q8IY31 132 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 MREGQ8N565 214 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ENAHQ8N8S7 591 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ACRBPQ8NEB7 543 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SHCBP1Q8NEM2 672 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TRPV1Q8NER1 839 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 AENQ8WTP8 325 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ANKS1AQ92625 1134 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TRIM43Q96BQ3 446 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC42Q96M95 316 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SH3GL2Q99962 352 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SLF1Q9BQI6 1058 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SELENOOQ9BVL4 669 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CDADC1Q9BWV3 514 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CAPS2Q9BXY5 557 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 RAB34Q9BZG1 259 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 KIAA1683Q9H0B3 1180 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ARMT1Q9H993 441 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 A1CFQ9NQ94 594 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ATP8A2Q9NTI2 1148 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 HOXC10Q9NYD6 342 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 GUCA1BQ9UMX6 200 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SNX12Q9UMY4 172 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SF3B6Q9Y3B4 125 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 FRMPD3Q5JV73 1810 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 VCANP13611 3396 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC194A0A1B0GVG4 234 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TTC26A0AVF1 554 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 LRRIQ3A6PVS8 624 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 FADS2P1A8MWK0 482 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 KIAA0355O15063 1070 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 EIF3HO15372 352 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TBX1O43435 398 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 SUSD5O60279 629 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ERLIN2O94905 339 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 GNA14O95837 355 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 SYF2O95926 243 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 IDEP14735 1019 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 VCAM1P19320 739 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ATP2B1P20020 1258 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ADORA2AP29274 412 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 GUCY1A2P33402 732 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CCT6AP40227 531 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 STX17P56962 302 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 GRIN1Q05586 938 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 FPGSQ05932 587 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CYP4F3Q08477 520 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 RAB33AQ14088 237 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 NR0B2Q15466 257 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 DDR2Q16832 855 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 SHROOM1Q2M3G4 852 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 DPY19L1Q2PZI1 675 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CFAP221Q4G0U5 840 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 VWA3BQ502W6 1294 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 SPECC1Q5M775 1068 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CWF19L1Q69YN2 538 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TATDN1Q6P1N9 297 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CROCCP2Q86T23 111 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 RNF180Q86T96 592 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ZSWIM9Q86XI8 627 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 BLIDQ8IZY5 108 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ABRAQ8N0Z2 381 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 LCORLQ8N3X6 602 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CSGALNACT2Q8N6G5 542 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 USP38Q8NB14 1042 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 NOA1Q8NC60 698 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 RASSF8Q8NHQ8 419 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ABHD4Q8TB40 342 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 P2RX5Q93086 422 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TIFAQ96CG3 184 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 LIN37Q96GY3 246 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 EPSTI1Q96J88 318 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 MRGPRX3Q96LB0 322 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 NAP1L4Q99733 375 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 C7orf25Q9BPX7 421 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 PLCD4Q9BRC7 762 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TUBGCP2Q9BSJ2 902 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 MYL10Q9BUA6 226 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 CRNKL1Q9BZJ0 848 aaKnown RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TTYH3Q9C0H2 523 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 RNF32Q9H0A6 362 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 VPS16Q9H269 839 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 ZSWIM4Q9H7M6 989 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 NHEJ1Q9H9Q4 299 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-203ENST00000554264 RIC8AQ9NPQ8 531 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 TAB2Q9NYJ8 693 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 VPS54Q9P1Q0 977 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 BTBD7Q9P203 1132 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 THEGQ9P2T0 379 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 SERPINB13Q9UIV8 391 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 EMC9Q9Y3B6 208 aa6.41□□□□□ -1.38
VPS33B-203ENST00000554264 A0A087X0B3 334 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA6L7A0A1B0GV03 622 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms