RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ALDH1A2O94788 518 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 SYPP08247 313 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 GCFC2P16383 781 aaKnown RBP18.36■□□□□ 0.53
NEK9-204ENST00000554258 GJA4P35212 333 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 ARL2P36404 184 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 HELZP42694 1942 aaKnown RBP18.36■□□□□ 0.53
NEK9-204ENST00000554258 CYP4F8P98187 520 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 SRSF1Q07955 248 aaKnown RBP eCLIP18.36■□□□□ 0.53
NEK9-204ENST00000554258 ORC2Q13416 577 aaPredicted RBP18.36■□□□□ 0.53
NEK9-204ENST00000554258 RILPL1Q5EBL4 403 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 FRMD1Q8N878 549 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 CD101Q93033 1021 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 PGLYRP2Q96PD5 576 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 ASB3Q9Y575 518 aa18.36■□□□□ 0.53
NEK9-204ENST00000554258 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 TTLL13PA6NNM8 815 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 PODXLO00592 558 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 MARCH6O60337 910 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 DUSP4Q13115 394 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 PPP2R5CQ13362 524 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 C2orf27AQ580R0 203 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 CC2D1AQ6P1N0 951 aaPredicted RBP18.35■□□□□ 0.53
NEK9-204ENST00000554258 DNAJB7Q7Z6W7 309 aaPredicted RBP18.35■□□□□ 0.53
NEK9-204ENST00000554258 GLRX5Q86SX6 157 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 MARCH9Q86YJ5 346 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
NEK9-204ENST00000554258 KIAA1522Q9P206 1035 aaPredicted RBP18.35■□□□□ 0.53
NEK9-204ENST00000554258 NOL7Q9UMY1 257 aaKnown RBP18.35■□□□□ 0.53
NEK9-204ENST00000554258 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
NEK9-204ENST00000554258 PRPF4BQ13523 1007 aaKnown RBP18.34■□□□□ 0.53
NEK9-204ENST00000554258 NBR1Q14596 966 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 CRY1Q16526 586 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 CPA6Q8N4T0 437 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 APPL2Q8NEU8 664 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 USP33Q8TEY7 942 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 PSMG2Q969U7 264 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 GCNAQ96QF7 691 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 CRISPLD1Q9H336 500 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.34■□□□□ 0.53
NEK9-204ENST00000554258 RGL1Q9NZL6 768 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
NEK9-204ENST00000554258 DOPEY2Q9Y3R5 2298 aa18.33■□□□□ 0.53
NEK9-204ENST00000554258 DGAT1O75907 488 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 VNN2O95498 520 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 SEC13P55735 322 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 BFSP1Q12934 665 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.52
NEK9-204ENST00000554258 TTC38Q5R3I4 469 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 LRRC69Q6ZNQ3 347 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 ITIH5Q86UX2 942 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 ZBTB8OSQ8IWT0 167 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 CCDC33Q8N5R6 958 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 C4orf32Q8N8J7 132 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 SLC46A2Q9BY10 475 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
NEK9-204ENST00000554258 FZD8Q9H461 694 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 KCNMB3Q9NPA1 279 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 MMP17Q9ULZ9 603 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 CCL26Q9Y258 94 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 TSC2P49815 1807 aa18.33■□□□□ 0.52
NEK9-204ENST00000554258 SMIM28A0A1B0GU29 152 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 CCNT1O60563 726 aaKnown RBP18.32■□□□□ 0.52
NEK9-204ENST00000554258 GJB3O75712 270 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 AVPR1AP37288 418 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
NEK9-204ENST00000554258 PDGFRLQ15198 375 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 FAM187BQ17R55 369 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 DCAF4L1Q3SXM0 396 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 FAM173BQ6P4H8 233 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 CMTM8Q8IZV2 173 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 GALNT15Q8N3T1 639 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 PDCD7Q8N8D1 485 aaKnown RBP18.32■□□□□ 0.52
NEK9-204ENST00000554258 DDX12PQ92771 950 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 BCCIPQ9P287 314 aaKnown RBP eCLIP18.32■□□□□ 0.52
NEK9-204ENST00000554258 DDX25Q9UHL0 483 aaKnown RBP18.32■□□□□ 0.52
NEK9-204ENST00000554258 SLC27A5Q9Y2P5 690 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 CITO14578 2027 aa18.32■□□□□ 0.52
NEK9-204ENST00000554258 TEX51A0A1B0GUA7 166 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 AP5Z1O43299 807 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 SLC37A4O43826 429 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 NTRK1P04629 796 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 OR4Q2P0C623 313 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
NEK9-204ENST00000554258 CDC25CP30307 473 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 MCM4P33991 863 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 CAMK2BQ13554 666 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 EPHA7Q15375 998 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 ZNF174Q15697 407 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 FOXD4L5Q5VV16 416 aaPredicted RBP18.31■□□□□ 0.52
NEK9-204ENST00000554258 EEF1DP3Q658K8 133 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 ATL3Q6DD88 541 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 GPR155Q7Z3F1 870 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 DEFB119Q8N690 84 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms