RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 SCARA3Q6AZY7 606 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 Q6ZS52 159 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 TMEM86AQ8N2M4 240 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 PDILTQ8N807 584 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 MAB21L3Q8N8X9 362 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 CXorf38Q8TB03 319 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 NOC3LQ8WTT2 800 aaKnown RBP16.99■□□□□ 0.31
TUBB3-203ENST00000553967 FAM84AQ96KN4 292 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 ACBD6Q9BR61 282 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-203ENST00000553967 PCIF1Q9H4Z3 704 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 PDE11AQ9HCR9 933 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 DDX43Q9NXZ2 648 aaKnown RBP16.99■□□□□ 0.31
TUBB3-203ENST00000553967 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 ITGA11Q9UKX5 1188 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 RAB23Q9ULC3 237 aa16.99■□□□□ 0.31
TUBB3-203ENST00000553967 F11P03951 625 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 KRT19P08727 400 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 DDX6P26196 483 aaKnown RBP eCLIP16.98■□□□□ 0.31
TUBB3-203ENST00000553967 AVPR1AP37288 418 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 RBP5P82980 135 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 LPAL2Q16609 132 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 INTS6LQ5JSJ4 861 aaKnown RBP16.98■□□□□ 0.31
TUBB3-203ENST00000553967 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 STKLD1Q8NE28 680 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 LEO1Q8WVC0 666 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-203ENST00000553967 GKN1Q9NS71 199 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 GDAP2Q9NXN4 497 aa16.98■□□□□ 0.31
TUBB3-203ENST00000553967 MAGED2Q9UNF1 606 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-203ENST00000553967 MED19A0JLT2 244 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 CHURC1-FNTBB4DL54 471 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 K7ESF4 209 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 STX6O43752 255 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 PAPSS2O95340 614 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 CSH1P0DML2 217 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 CSH2P0DML3 217 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 TGM1P22735 817 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 ACAT1P24752 427 aaKnown RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 FNTBP49356 437 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 MYL7Q01449 175 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 DMWDQ09019 674 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 CCINQ13939 588 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 DDR2Q16832 855 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 SDHAF4Q5VUM1 108 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 TXNDC8Q6A555 127 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 LAIR1Q6GTX8 287 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 PRR23BQ6ZRT6 265 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 GPD1LQ8N335 351 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 TOP6BLQ8N6T0 577 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 MRPS31Q92665 395 aaKnown RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 USP13Q92995 863 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-203ENST00000553967 FAM83CQ9BQN1 747 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 ABCB6Q9NP58 842 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 SIX4Q9UIU6 781 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 USP18Q9UMW8 372 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 CCL26Q9Y258 94 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
TUBB3-203ENST00000553967 DENND4CQ5VZ89 1909 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 SOBPA7XYQ1 873 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.31
TUBB3-203ENST00000553967 TMEM191BP0C7N4 346 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 SDHBP21912 280 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 CYP2F1P24903 491 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 LHX1P48742 406 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.31
TUBB3-203ENST00000553967 LMNB2Q03252 620 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 STK38Q15208 465 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-203ENST00000553967 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 MON1AQ86VX9 555 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 ADGRF2Q8IZF7 708 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 LINC00301Q8NCQ3 95 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 SPATA18Q8TC71 538 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 PKMYT1Q99640 499 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 KIF9Q9HAQ2 790 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 TDP1Q9NUW8 608 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 C2orf42Q9NWW7 574 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 UXTQ9UBK9 157 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-203ENST00000553967 GTF3C4Q9UKN8 822 aa16.96■□□□□ 0.31
TUBB3-203ENST00000553967 KIF26AQ9ULI4 1882 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-203ENST00000553967 ZNF638Q14966 1978 aaKnown RBP16.95■□□□□ 0.3
TUBB3-203ENST00000553967 PRR5-ARHGAP8B1AHC4 643 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 GABRDO14764 452 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 HRO43593 1189 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 PCSK1P29120 753 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 CNR2P34972 360 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 ARHGAP8P85298 464 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 MYO1EQ12965 1108 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 RUNX3Q13761 415 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 SIM2Q14190 667 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-203ENST00000553967 SOWAHAQ2M3V2 549 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 HEATR6Q6AI08 1181 aaKnown RBP16.95■□□□□ 0.3
TUBB3-203ENST00000553967 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms