RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PLCD1P51178 756 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 GYS2P54840 703 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 NANOS2P60321 138 aaKnown RBP3.12□□□□□ -1.91
SRP54-204ENST00000553923 IL10RAQ13651 578 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 LEXMQ3ZCV2 418 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 PCID2Q5JVF3 399 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 KIAA1161Q6NSJ0 714 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 PPP1R32Q7Z5V6 425 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 KRT78Q8N1N4 520 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 NANOGP1Q8N7R0 232 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 PNLDC1Q8NA58 520 aaKnown RBP3.12□□□□□ -1.91
SRP54-204ENST00000553923 C16orf52Q8NHV5 167 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 CYP2W1Q8TAV3 490 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 FSD1LQ9BXM9 530 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 TRNAU1APQ9NX07 287 aaKnown RBP3.12□□□□□ -1.91
SRP54-204ENST00000553923 TMA7Q9Y2S6 64 aaKnown RBP3.12□□□□□ -1.91
SRP54-204ENST00000553923 NOTCH4Q99466 2003 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 FAM90A10PA6NDY2 464 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 HTRA2O43464 458 aaPredicted RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 CHEK2O96017 543 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 IL6RP08887 468 aaPredicted RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 CD6P30203 668 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 TMPRSS15P98073 1019 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 SP2Q02086 613 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 BOP1Q14137 746 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 TRIM71Q2Q1W2 868 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 C3orf36Q3SXR2 165 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 CCDC93Q567U6 631 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 TAF7LQ5H9L4 462 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 TEDDM1Q5T9Z0 273 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 NAPRTQ6XQN6 538 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 NOL8Q76FK4 1167 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 MIGA2Q7L4E1 593 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 MRPL10Q7Z7H8 261 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 CNGA4Q8IV77 575 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 AOPEPQ8N6M6 819 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.11□□□□□ -1.91
SRP54-204ENST00000553923 HDAC10Q969S8 669 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 RLIMQ9NVW2 624 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 SIDT1Q9NXL6 827 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 KLHL13Q9P2N7 655 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
SRP54-204ENST00000553923 LIMCH1Q9UPQ0 1083 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 SH2B3Q9UQQ2 575 aa3.11□□□□□ -1.91
SRP54-204ENST00000553923 QSOX1O00391 747 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 NDUFS2O75306 463 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 ALPLP05186 524 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 CYP2A6P11509 494 aaPredicted RBP3.1□□□□□ -1.91
SRP54-204ENST00000553923 CHRM3P20309 590 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 ITGALP20701 1170 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 PSMC1P62191 440 aaKnown RBP3.1□□□□□ -1.91
SRP54-204ENST00000553923 SNAPC2Q13487 334 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 MEX3CQ5U5Q3 659 aaKnown RBP3.1□□□□□ -1.91
SRP54-204ENST00000553923 FCRL6Q6DN72 434 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 MIS18BP1Q6P0N0 1132 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 TRIM72Q6ZMU5 477 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 PIP4P1Q86T03 277 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 PRSS3P2Q8NHM4 247 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 JADE3Q92613 823 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 CLPTM1LQ96KA5 538 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 THAP7Q9BT49 309 aaPredicted RBP3.1□□□□□ -1.91
SRP54-204ENST00000553923 CAAP1Q9H8G2 361 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 BRD9Q9H8M2 597 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 CADPSQ9ULU8 1353 aa3.1□□□□□ -1.91
SRP54-204ENST00000553923 ZNF785A8K8V0 405 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 H7C1Q1 480 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 SLC16A3O15427 465 aaKnown RBP3.09□□□□□ -1.91
SRP54-204ENST00000553923 GPR39O43194 453 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 TJP3O95049 919 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 GJB1P08034 283 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 PRF1P14222 555 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 ENGP17813 658 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 MALP21145 153 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 CYP2C19P33261 490 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 ERV3-1Q14264 604 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 INAVAQ3KP66 663 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 KHDC1Q4VXA5 237 aaKnown RBP3.09□□□□□ -1.91
SRP54-204ENST00000553923 TREML2Q5T2D2 321 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 C10orf25Q5T742 122 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 SHC4Q6S5L8 630 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 GADL1Q6ZQY3 521 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 C9orf47Q6ZRZ4 202 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 NOP9Q86U38 636 aaKnown RBP3.09□□□□□ -1.91
SRP54-204ENST00000553923 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.09□□□□□ -1.91
SRP54-204ENST00000553923 NSUN6Q8TEA1 469 aaKnown RBP3.09□□□□□ -1.91
SRP54-204ENST00000553923 NELL2Q99435 816 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 CNPPD1Q9BV87 410 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 ADAMTS5Q9UNA0 930 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 RAD54BQ9Y620 910 aa3.09□□□□□ -1.91
SRP54-204ENST00000553923 CD8B2A6NJW9 211 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 POC1B-GALNT4F8VUJ3 575 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 MARCH6O60337 910 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 TLR5O60602 858 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 VPS4BO75351 444 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 OAZ2O95190 189 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 KIF20AO95235 890 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 TMEM191BP0C7N4 346 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 C5AR1P21730 350 aa3.08□□□□□ -1.92
SRP54-204ENST00000553923 IL1R2P27930 398 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms