RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 HSDL1Q3SXM5 330 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PPP1R15BQ5SWA1 713 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 RNASEH2BQ5TBB1 312 aaKnown RBP15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PPP1R21Q6ZMI0 780 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 TRABDQ9H4I3 376 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 SLCO1B3Q9NPD5 702 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 IGF2BP3O00425 579 aaKnown RBP eCLIP15.33■□□□□ 0.051e-11■■■■□ 20.1
ACTN1-211ENST00000553882 CD48P09326 243 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 IL1R2P27930 398 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 IL9RQ01113 521 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 EFTUD2Q15029 972 aaKnown RBP eCLIP15.33■□□□□ 0.05
ACTN1-211ENST00000553882 PPP1R2P3Q6NXS1 205 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 CCDC91Q7Z6B0 441 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 TMEM192Q8IY95 271 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 KIAA0319LQ8IZA0 1049 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 CHST13Q8NET6 341 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 ACTL9Q8TC94 416 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 KLHL14Q9P2G3 628 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 PCSK1NQ9UHG2 260 aa15.33■□□□□ 0.05
ACTN1-211ENST00000553882 SIP14410 1827 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 A0A1W2PPM1 405 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 INO80B-WBP1J3KQ70 363 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 CST8O60676 142 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 CSDE1O75534 798 aaKnown RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 ARIH2O95376 493 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 HOXC6P09630 235 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 KRT3P12035 628 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 RPA3P35244 121 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 EFNA5P52803 228 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 NRLP54845 237 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 OTUD4Q01804 1114 aaKnown RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 MORF4L2Q15014 288 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 MTFR1Q15390 333 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 LRRC38Q5VT99 294 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 ANKRD22Q5VYY1 191 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 FAM160B1Q5W0V3 765 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 DRICH1Q6PGQ1 229 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 ARFGAP1Q8N6T3 406 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 SEPT1Q8WYJ6 367 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 KLHL29Q96CT2 875 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 INO80BQ9C086 356 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 XYLT2Q9H1B5 865 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 CPSF3Q9UKF6 684 aaKnown RBP15.33■□□□□ 0.04
ACTN1-211ENST00000553882 GRID1Q9ULK0 1009 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 STK38LQ9Y2H1 464 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 CENPFP49454 3210 aa15.33■□□□□ 0.04
ACTN1-211ENST00000553882 LRCH4O75427 683 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 CA4P22748 312 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 COPS2P61201 443 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 BNIP1Q12981 228 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 GALNTL6Q49A17 601 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 CENPUQ71F23 418 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 DPH6Q7L8W6 267 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 KCNN1Q92952 543 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 PRKAG3Q9UGI9 489 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 ACTL7BQ9Y614 415 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 ASMTLO95671 621 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 ITGAVP06756 1048 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 PGK2P07205 417 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 CXCL8P10145 99 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 NQO1P15559 274 aaKnown RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 SSTR1P30872 391 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 AP3M2P53677 418 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 NEDD9Q14511 834 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 TAF5Q15542 800 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 HIF1AQ16665 826 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 APOBEC3FQ8IUX4 373 aaKnown RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 ZBTB8OSQ8IWT0 167 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 RIBC1Q8N443 379 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-211ENST00000553882 GPATCH11Q8N954 259 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 TTC25Q96NG3 672 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 SMC6Q96SB8 1091 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 CPXM1Q96SM3 734 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 FOXP3Q9BZS1 431 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 RXFP1Q9HBX9 757 aa15.32■□□□□ 0.04
ACTN1-211ENST00000553882 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 A8MUI8 341 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 ABLIM1O14639 778 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 MAP2K2P36507 400 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 EEF1DP3Q658K8 133 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 LBX2Q6XYB7 198 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 NKD2Q969F2 451 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 PPP1R16BQ96T49 567 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 PCDH9Q9HC56 1237 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 HMGXB4Q9UGU5 601 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms