RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 ETS2P15036 469 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 PLCG1P19174 1290 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 GTF2H1P32780 548 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 CNTN2Q02246 1040 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 ASPHQ12797 758 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 SPARCL1Q14515 664 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 PFKFB3Q16875 520 aaPredicted RBP10.55□□□□□ -0.72
CFAP54-204ENST00000553778 LONRF1Q17RB8 773 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
CFAP54-204ENST00000553778 ZNF449Q6P9G9 518 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 IZUMO2Q6UXV1 221 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 ZNF467Q7Z7K2 595 aaPredicted RBP10.55□□□□□ -0.72
CFAP54-204ENST00000553778 BBS5Q8N3I7 341 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 TRIB2Q92519 343 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
CFAP54-204ENST00000553778 LRRC27Q9C0I9 530 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 CDC42EP4Q9H3Q1 356 aaKnown RBP10.55□□□□□ -0.72
CFAP54-204ENST00000553778 NRDE2Q9H7Z3 1164 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 C17orf75Q9HAS0 396 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 ZNHIT2Q9UHR6 403 aa10.55□□□□□ -0.72
CFAP54-204ENST00000553778 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 HTR3EA5X5Y0 456 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 MIF4GDA9UHW6 222 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 FKBP6O75344 327 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 LGR5O75473 907 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TTC4O95801 387 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 POLR2MP0CAP2 368 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ANPEPP15144 967 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 CREB1P16220 341 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NEK3P51956 506 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NAPAP54920 295 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 HADHBP55084 474 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 GEMIN4P57678 1058 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 AP2B1P63010 937 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ORC2Q13416 577 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 MED21Q13503 144 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TRMT5Q32P41 509 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 AAGABQ6PD74 315 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 Q6ZNX1 250 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NLRP9Q7RTR0 991 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NET1Q7Z628 596 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 CABP7Q86V35 215 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TRIM59Q8IWR1 403 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 GLG1Q92896 1179 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 PRICKLE1Q96MT3 831 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TINF2Q9BSI4 451 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 INIPQ9NRY2 104 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 EURLQ9NYK6 297 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 FLRT1Q9NZU1 646 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 SMG5Q9UPR3 1016 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NR2E1Q9Y466 385 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 FADS3Q9Y5Q0 445 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ARHGAP10A1A4S6 786 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ASB14A6NK59 587 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 GYG2O15488 501 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 EXOC3O60645 756 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 RNASEH1O60930 286 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 INHAP05111 366 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 CAV1Q03135 178 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 CDC16Q13042 620 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 KYNUQ16719 465 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 DCAF12L1Q5VU92 463 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 GRAMD4Q6IC98 578 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 C1orf228Q6PIY5 440 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 EPM2AIP1Q7L775 607 aaPredicted RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 RELL1Q8IUW5 271 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 DAGLBQ8NCG7 672 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 DENND1AQ8TEH3 1009 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 RFFLQ8WZ73 363 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NSL1Q96IY1 281 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 VPS50Q96JG6 964 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
CFAP54-204ENST00000553778 TTC25Q96NG3 672 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 SIKE1Q9BRV8 207 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 PSTPIP2Q9H939 334 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ERVK-5Q9HDB9 667 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 NDE1Q9NXR1 346 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 BARHL2Q9NY43 387 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 DMTF1Q9Y222 760 aa10.54□□□□□ -0.72
CFAP54-204ENST00000553778 ZNFX1Q9P2E3 1918 aaKnown RBP10.53□□□□□ -0.72
CFAP54-204ENST00000553778 TRIM43BA6NCK2 446 aa10.53□□□□□ -0.72
CFAP54-204ENST00000553778 SOWAHBA6NEL2 793 aa10.53□□□□□ -0.72
CFAP54-204ENST00000553778 SMCO2A6NFE2 343 aa10.53□□□□□ -0.72
CFAP54-204ENST00000553778 MATN2O00339 956 aa10.53□□□□□ -0.72
CFAP54-204ENST00000553778 VILLO15195 856 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms