RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 PDGFRBP09619 1106 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 GJA1P17302 382 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 WARSP23381 471 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 GNL1P36915 607 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 FAM171BQ6P995 826 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 SV2AQ7L0J3 742 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 FAM186BQ8IYM0 893 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 EEF2KMTQ96G04 330 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 GPR88Q9GZN0 384 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 SNX25Q9H3E2 840 aa10.93□□□□□ -0.66
HNRNPC-208ENST00000553753 ATP2C2O75185 946 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ECI2O75521 394 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 CLSTN1O94985 981 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 VNN1O95497 513 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 FGF19O95750 216 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 KRT13P13646 458 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 CYP2F1P24903 491 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 UBE2HP62256 183 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 GPC5P78333 572 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ENPEPQ07075 957 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 TEAD2Q15562 447 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 MAPRE1Q15691 268 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 TAF12Q16514 161 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ZNF667Q5HYK9 610 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 FAM78AQ5JUQ0 283 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 C1orf220Q5T0J3 134 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 C4orf50Q6ZRC1 276 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SPATA2LQ8IUW3 424 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SIX5Q8N196 739 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 OR6B3Q8NGW1 331 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SHKBP1Q8TBC3 707 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 GPR152Q8TDT2 470 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 GIPC2Q8TF65 315 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.669e-8■■□□□ 14.1
HNRNPC-208ENST00000553753 ZSWIM3Q96MP5 696 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ASB16Q96NS5 453 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SYT15Q9BQS2 421 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 MRPL45Q9BRJ2 306 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 MFSD1Q9H3U5 465 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SLITRK6Q9H5Y7 841 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ZFP14Q9HCL3 533 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 ZNF334Q9HCZ1 680 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 SLC2A4RGQ9NR83 387 aa10.92□□□□□ -0.66
HNRNPC-208ENST00000553753 MYO15AQ9UKN7 3530 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 CETN3O15182 167 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 GABRR2P28476 465 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 PSMC1P62191 440 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 RPL10AP62906 217 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 FKBP3Q00688 224 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 DDR2Q16832 855 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 CCDC142Q17RM4 750 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ANKRD40Q6AI12 368 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ISM2Q6H9L7 571 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 TANGO2Q6ICL3 276 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ADSSL1Q8N142 457 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ZSCAN18Q8TBC5 510 aaPredicted RBP10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 SMARCD2Q92925 531 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ELSPBP1Q96BH3 223 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 TSG101Q99816 390 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 MKNK1Q9BUB5 465 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ATXN3LQ9H3M9 355 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 CRTAC1Q9NQ79 661 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 MUC6Q6W4X9 2439 aa10.91□□□□□ -0.66
HNRNPC-208ENST00000553753 A8MXQ7 604 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 TRIM49P0CI25 452 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 TRIM49CP0CI26 452 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 CSH1P0DML2 217 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 CSH2P0DML3 217 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 P4HA1P13674 534 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 FCARP24071 287 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 CDC25CP30307 473 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 AVPR2P30518 371 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 GCLMP48507 274 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 GPR15P49685 360 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 PMS1P54277 932 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 CDH8P55286 799 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 LRRC63Q05C16 580 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 PPP3CAQ08209 521 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 STIM1Q13586 685 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 MYCBPAPQ8TBZ2 947 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 TAF4BQ92750 862 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 ELMO3Q96BJ8 720 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 PCED1BQ96HM7 432 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 PLA2G2FQ9BZM2 168 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 MAGEC2Q9UBF1 373 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 MAN1B1Q9UKM7 699 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 DMDP11532 3685 aa10.9□□□□□ -0.66
HNRNPC-208ENST00000553753 KRBA1A5PL33 1030 aa10.9□□□□□ -0.67
HNRNPC-208ENST00000553753 PSMA7O14818 248 aa10.9□□□□□ -0.67
HNRNPC-208ENST00000553753 ASS1P00966 412 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms