RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ALDH9A1P49189 494 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 TOB1P50616 345 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-210ENST00000553693 NKX6-1P78426 367 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-210ENST00000553693 EXOSC9Q06265 439 aaKnown RBP5.09□□□□□ -1.59
SCFD1-210ENST00000553693 AMOTQ4VCS5 1084 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 HPS3Q969F9 1004 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 SLC46A1Q96NT5 459 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 ARHGEF3Q9NR81 526 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 CNNM1Q9NRU3 951 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 SERTAD4Q9NUC0 356 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 ADAM21Q9UKJ8 722 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 SH2B3Q9UQQ2 575 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 ANKRD62A6NC57 917 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 LINC01548A6NM66 108 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 SLC16A3O15427 465 aaKnown RBP5.08□□□□□ -1.6
SCFD1-210ENST00000553693 UNC5CO95185 931 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 ONECUT2O95948 504 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 HNRNPCP07910 306 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCFD1-210ENST00000553693 ITGB6P18564 788 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 PCSK6P29122 969 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 ABCG1P45844 678 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 KCNJ5P48544 419 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 SOX8P57073 446 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 ANAPC15P60006 121 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 SATB1Q01826 763 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 EIF2B5Q13144 721 aaKnown RBP5.08□□□□□ -1.6
SCFD1-210ENST00000553693 IQCB1Q15051 598 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 CEP85Q6P2H3 762 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 ANKRD16Q6P6B7 361 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 DTX2Q86UW9 622 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 GRAMD1CQ8IYS0 662 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 PCSK9Q8NBP7 692 aaKnown RBP5.08□□□□□ -1.6
SCFD1-210ENST00000553693 TBC1D5Q92609 795 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 HOOK2Q96ED9 719 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 C1GALT1C1Q96EU7 318 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 IP6K2Q9UHH9 426 aa5.08□□□□□ -1.6
SCFD1-210ENST00000553693 E2F8A0AVK6 867 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 WIPF3A6NGB9 483 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 DNAJB5O75953 348 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 GRPP07492 148 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 VIPR2P41587 438 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 PXNP49023 591 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-210ENST00000553693 ZNF134P52741 427 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 LLGL1Q15334 1064 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 EZH2Q15910 746 aaKnown RBP5.07□□□□□ -1.6
SCFD1-210ENST00000553693 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 ATAT1Q5SQI0 421 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 IFIT1BQ5T764 474 aaKnown RBP5.07□□□□□ -1.6
SCFD1-210ENST00000553693 SLC29A4Q7RTT9 530 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 WDR53Q7Z5U6 358 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-210ENST00000553693 SMG7Q92540 1137 aaKnown RBP5.07□□□□□ -1.6
SCFD1-210ENST00000553693 ANKS1AQ92625 1134 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 DPF1Q92782 380 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 GPATCH3Q96I76 525 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 PTDSS2Q9BVG9 487 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 DKK3Q9UBP4 350 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 SHOC2Q9UQ13 582 aa5.07□□□□□ -1.6
SCFD1-210ENST00000553693 AOX1Q06278 1338 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 hCG_2014768A0A024R1R8 64 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 CGB1A6NKQ9 187 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 TARM1B6A8C7 271 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 QSOX1O00391 747 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 DCLK1O15075 740 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 PPM1DO15297 605 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 ABLIM3O94929 683 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 BOP1Q14137 746 aaKnown RBP5.06□□□□□ -1.6
SCFD1-210ENST00000553693 AARS2Q5JTZ9 985 aaKnown RBP5.06□□□□□ -1.6
SCFD1-210ENST00000553693 SEMA6DQ8NFY4 1073 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 CGRRF1Q99675 332 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 SERHLQ9NQF3 203 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 FLRT1Q9NZU1 646 aa5.06□□□□□ -1.6
SCFD1-210ENST00000553693 PNMA8BQ9ULN7 279 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-210ENST00000553693 ALDH1L1O75891 902 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 JTBO76095 146 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 ALDH2P05091 517 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 PDHA1P08559 390 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 FAM163BP0C2L3 166 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 HDCP19113 662 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 GRM1Q13255 1194 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-210ENST00000553693 SRSF7Q16629 238 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCFD1-210ENST00000553693 ARHGAP40Q5TG30 622 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 MAVSQ7Z434 540 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 DENND1CQ8IV53 801 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 FANCBQ8NB91 859 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 SEMA4CQ9C0C4 833 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 NMRK2Q9NPI5 230 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 SERGEFQ9UGK8 458 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 SERTAD3Q9UJW9 196 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 PCDHA6Q9UN73 950 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 MED16Q9Y2X0 877 aa5.05□□□□□ -1.6
SCFD1-210ENST00000553693 H0YIZ8 118 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 MYO1CO00159 1063 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 ERBB2P04626 1255 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 THP07101 528 aa5.04□□□□□ -1.6
SCFD1-210ENST00000553693 CELA2AP08217 269 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms