RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 LRPAP1P30533 357 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 PHKA1P46020 1223 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 KCNJ5P48544 419 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 CACNB3P54284 484 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 BMPR2Q13873 1038 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 PLAC9Q5JTB6 97 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 RBM20Q5T481 1227 aaKnown RBP4.17□□□□□ -1.74
VRK1-202ENST00000553683 LAYNQ6UX15 382 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 NPNTQ6UXI9 565 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 MAEAQ7L5Y9 396 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 OVCH2Q7RTZ1 564 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ZBTB34Q8NCN2 500 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 MYCBPAPQ8TBZ2 947 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ATRIPQ8WXE1 791 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ANKS1AQ92625 1134 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 UROC1Q96N76 676 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 PTDSS2Q9BVG9 487 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 EHD3Q9NZN3 535 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 SHOC2Q9UQ13 582 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.17□□□□□ -1.74
VRK1-202ENST00000553683 A0A087WWL8 130 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 UNC5CO95185 931 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 GRPP07492 148 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 RPL17P18621 184 aaKnown RBP4.16□□□□□ -1.74
VRK1-202ENST00000553683 EN2P19622 333 aaPredicted RBP4.16□□□□□ -1.74
VRK1-202ENST00000553683 PXNP49023 591 aaPredicted RBP4.16□□□□□ -1.74
VRK1-202ENST00000553683 HNRNPMP52272 730 aaKnown RBP eCLIP4.16□□□□□ -1.74
VRK1-202ENST00000553683 MLC1Q15049 377 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 TXNRD1Q16881 649 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 GFOD2Q3B7J2 385 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 ZNF618Q5T7W0 954 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 LMBRD2Q68DH5 695 aaPredicted RBP4.16□□□□□ -1.74
VRK1-202ENST00000553683 SLC30A10Q6XR72 485 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 ZNF783Q6ZMS7 281 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 CHST15Q7LFX5 561 aaPredicted RBP4.16□□□□□ -1.74
VRK1-202ENST00000553683 GAS2L3Q86XJ1 694 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 MYO1HQ8N1T3 1032 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 FAM46DQ8NEK8 389 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 TOR1AIP2Q8NFQ8 470 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 OR6B3Q8NGW1 331 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 LRGUKQ96M69 825 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 TPSD1Q9BZJ3 242 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 SMOC2Q9H3U7 446 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 ADGRA2Q96PE1 1338 aa4.16□□□□□ -1.74
VRK1-202ENST00000553683 ADM5C9JUS6 153 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 MYO1CO00159 1063 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 MYO1FO00160 1098 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 DCLK1O15075 740 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 URI1O94763 535 aaPredicted RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 CD38P28907 300 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 SLC11A2P49281 568 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 MAPK10P53779 464 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 GBX1Q14549 363 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 SLC44A4Q53GD3 710 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 ZNF362Q5T0B9 420 aaPredicted RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 WDR53Q7Z5U6 358 aaPredicted RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 PEG10Q86TG7 708 aaKnown RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 RAVER1Q8IY67 606 aaKnown RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 IL31RAQ8NI17 732 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 PPP1R35Q8TAP8 253 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 RFKQ969G6 155 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 FKBP10Q96AY3 582 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 SLC46A1Q96NT5 459 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 BBC3Q96PG8 261 aaPredicted RBP4.15□□□□□ -1.75
VRK1-202ENST00000553683 MESP1Q9BRJ9 268 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 PCGF6Q9BYE7 350 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 ARMT1Q9H993 441 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 XPNPEP3Q9NQH7 507 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 PRDM11Q9NQV5 511 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
VRK1-202ENST00000553683 OVOL3O00110 214 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 BTN3A1O00481 513 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 SLC16A3O15427 465 aaKnown RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 VPS4BO75351 444 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ZBED1O96006 694 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 C1RP00736 705 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 NPR1P16066 1061 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 RAB32Q13637 225 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 BOP1Q14137 746 aaKnown RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 E2F2Q14209 437 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ARHGAP29Q52LW3 1261 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 FBXO42Q6P3S6 717 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ANKRD16Q6P6B7 361 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 SYCE2Q6PIF2 218 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 MTHFD1LQ6UB35 978 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 TMEM108Q6UXF1 575 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ZNF551Q7Z340 670 aaPredicted RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 TFAP2BQ92481 460 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 NMD3Q96D46 503 aaKnown RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 ZNF764Q96H86 408 aaPredicted RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 B3GNT5Q9BYG0 378 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ZNF518BQ9C0D4 1074 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 ZMAT3Q9HA38 289 aaKnown RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 ATP6V0A4Q9HBG4 840 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 KIAA1586Q9HCI6 787 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms