RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 SULT6B1Q6IMI4 303 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 LRRTM4Q86VH4 590 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 HERC6Q8IVU3 1022 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 ZFPM1Q8IX07 1006 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 KBTBD2Q8IY47 623 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 PDPRQ8NCN5 879 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 SLC17A8Q8NDX2 589 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 OR1N1Q8NGS0 311 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 ZFP28Q8NHY6 868 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 SLC30A5Q8TAD4 765 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 ASB12Q8WXK4 309 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 RAPGEF4Q8WZA2 1011 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 DACT3Q96B18 629 aaPredicted RBP4.52□□□□□ -1.69
TDP1-207ENST00000553617 PPP1R9BQ96SB3 815 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 FAM167BQ9BTA0 163 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 DDX23Q9BUQ8 820 aaKnown RBP4.52□□□□□ -1.69
TDP1-207ENST00000553617 CNPPD1Q9BV87 410 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 PCDHAC1Q9H158 963 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 HDAC9Q9UKV0 1011 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 ZMYND8Q9ULU4 1186 aaPredicted RBP4.52□□□□□ -1.69
TDP1-207ENST00000553617 TBC1D30Q9Y2I9 924 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 DTNAQ9Y4J8 743 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 A0A1W2PRX2 142 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 OR2W5A6NFC9 320 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 MROH6A6NGR9 719 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TISP43B9A030 160 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 B9A039 149 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 H7C4K7 107 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 RAB27BO00194 218 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 PCDH17O14917 1159 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TRIM13O60858 407 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 PRSS23O95084 383 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 GLP2RO95838 553 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 ITGA2BP08514 1039 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 PECAM1P16284 738 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 MST1P26927 711 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 CST5P28325 142 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 RXRGP48443 463 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 JAG1P78504 1218 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 MPP1Q00013 466 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 CNGB1Q14028 1251 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 BOP1Q14137 746 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 TAF12Q16514 161 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TIGD6Q17RP2 521 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 FAM110CQ1W6H9 321 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 PLA1AQ53H76 456 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 RETSATQ6NUM9 610 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 DRICH1Q6PGQ1 229 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 C1orf122Q6ZSJ8 110 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 GATAD2AQ86YP4 633 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 CCDC28AQ8IWP9 274 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 COLGALT2Q8IYK4 626 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TP53I13Q8NBR0 393 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 TBC1D15Q8TC07 691 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 HERVK_113Q902F9 699 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TFAP2CQ92754 450 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 RILPL2Q969X0 211 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 ZNF512Q96ME7 567 aaPredicted RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 TLR10Q9BXR5 811 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 IMPG2Q9BZV3 1241 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 WASH6PQ9NQA3 447 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 DNMT3BQ9UBC3 853 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 HERC5Q9UII4 1024 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 CA14Q9ULX7 337 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 ATP11BQ9Y2G3 1177 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 TMEM98Q9Y2Y6 226 aa4.51□□□□□ -1.69
TDP1-207ENST00000553617 MTO1Q9Y2Z2 717 aaKnown RBP4.51□□□□□ -1.69
TDP1-207ENST00000553617 FER1L4A9Z1Z3 1794 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 B4GALT3O60512 393 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 ITGB1P05556 798 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FCER1AP12319 257 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 GCSHP23434 173 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 SLC5A2P31639 672 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 ADD2P35612 726 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 POLE2P56282 527 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 RAC3P60763 192 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 NSUN2Q08J23 767 aaKnown RBP eCLIP4.5□□□□□ -1.69
TDP1-207ENST00000553617 MESP2Q0VG99 397 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 INSCQ1MX18 579 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 ZNF750Q32MQ0 723 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 ZIK1Q3SY52 487 aaPredicted RBP4.5□□□□□ -1.69
TDP1-207ENST00000553617 NOMO2Q5JPE7 1267 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 METTL24Q5JXM2 366 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 MRNIPQ6NTE8 343 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FAM111BQ6SJ93 734 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 MAATS1Q7Z4T9 603 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FAM83AQ86UY5 434 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 CPOQ8IVL8 374 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
TDP1-207ENST00000553617 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 OR52N2Q8NGI0 321 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 NUP133Q8WUM0 1156 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 THAP4Q8WY91 577 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 NEIL1Q96FI4 390 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms