RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ARHGEF19Q8IW93 802 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 HDAC10Q969S8 669 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 GSTO2Q9H4Y5 243 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 CYP4F11Q9HBI6 524 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 DDX21Q9NR30 783 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-218ENST00000553309 TDP1Q9NUW8 608 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 LIMCH1Q9UPQ0 1083 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 DMRT1Q9Y5R6 373 aa6.25□□□□□ -1.41
ATXN3-218ENST00000553309 MAP2P11137 1827 aaKnown RBP6.25□□□□□ -1.41
ATXN3-218ENST00000553309 RGPD2P0DJD1 1756 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 UNC119BA6NIH7 251 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 FZD9O00144 591 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 B3GALT2O43825 422 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 MXRA7P84157 204 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 GUCY1B3Q02153 619 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 KIF23Q02241 960 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-218ENST00000553309 MIGA2Q7L4E1 593 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 MAPKAPK5Q8IW41 473 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 TMEM132CQ8N3T6 1108 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 COA7Q96BR5 231 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 TEKT5Q96M29 485 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 IPPQ9Y573 584 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 TRIOBPQ9H2D6 2365 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 TTC21AQ8NDW8 1320 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 ZNF541Q9H0D2 1346 aa6.24□□□□□ -1.41
ATXN3-218ENST00000553309 A0A1B0GTW7 788 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 CCDC154A6NI56 674 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
ATXN3-218ENST00000553309 HTRA2O43464 458 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-218ENST00000553309 CFIP05156 583 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ELANEP08246 267 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 CKBP12277 381 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ALAS1P13196 640 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 EPHX2P34913 555 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 MAP2K2P36507 400 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 CTXN1P60606 82 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 KRT85P78386 507 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 TAP1Q03518 808 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-218ENST00000553309 IL10RAQ13651 578 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ODF1Q14990 250 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 PTPROQ16827 1216 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 LCORLQ8N3X6 602 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 TMX3Q96JJ7 454 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ADAM2Q99965 735 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ZSWIM1Q9BR11 485 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 HACL1Q9UJ83 578 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ADAMTSL1Q8N6G6 1762 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 RNF123Q5XPI4 1314 aa6.23□□□□□ -1.41
ATXN3-218ENST00000553309 ITGB4P16144 1822 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 KTN1Q86UP2 1357 aaKnown RBP6.22□□□□□ -1.41
ATXN3-218ENST00000553309 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
ATXN3-218ENST00000553309 GCSHP23434 173 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 EDNRBP24530 442 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 PURAQ00577 322 aaKnown RBP6.22□□□□□ -1.41
ATXN3-218ENST00000553309 TP53BP2Q13625 1128 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 ATP2B3Q16720 1220 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 CST9Q5W186 159 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 C2CD5Q86YS7 1000 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 FITM2Q8N6M3 262 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 MARS2Q96GW9 593 aaKnown RBP6.22□□□□□ -1.41
ATXN3-218ENST00000553309 AGAP2Q99490 1192 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 SLC13A1Q9BZW2 595 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 C11orf54Q9H0W9 315 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-218ENST00000553309 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 SPEF1Q9Y4P9 236 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 NOX1Q9Y5S8 564 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 PCDH11XQ9BZA7 1347 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 PCDH11YQ9BZA8 1340 aa6.22□□□□□ -1.41
ATXN3-218ENST00000553309 CARMIL3Q8ND23 1372 aa6.21□□□□□ -1.41
ATXN3-218ENST00000553309 SCN4AP35499 1836 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 CCDC78A2IDD5 438 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 MARCH11A6NNE9 402 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 SPDEFO95238 335 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 IBSPP21815 317 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 USP14P54578 494 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 CDC42EP1Q00587 391 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 DACT2Q5SW24 774 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 ARMC6Q6NXE6 501 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 FOXR2Q6PJQ5 311 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 CMTR2Q8IYT2 770 aaKnown RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 NLGN4YQ8NFZ3 816 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 GPR150Q8NGU9 434 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 TBC1D15Q8TC07 691 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 RAPGEF4Q8WZA2 1011 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 IP6K1Q92551 441 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 SMAD5Q99717 465 aaKnown RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 ALOXE3Q9BYJ1 711 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 ASPSCR1Q9BZE9 553 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 HOMER2Q9NSB8 354 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 A0A0C4DFX4 3053 aa6.21□□□□□ -1.42
ATXN3-218ENST00000553309 CENPJQ9HC77 1338 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms