RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 LRRIQ1Q96JM4 1722 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 MPPED1O15442 326 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 PROM1O43490 865 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 AKAP10O43572 662 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 AP1G1O43747 822 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 OFD1O75665 1012 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 KIF20AO95235 890 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 GNAI2P04899 355 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 ALDH2P05091 517 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 NPTX2P47972 431 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 NKX6-1P78426 367 aaPredicted RBP6□□□□□ -1.45
ATXN3-217ENST00000553287 KIAA0895LQ68EN5 471 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 TAF2Q6P1X5 1199 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 C1GALT1C1Q96EU7 318 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 CDK5RAP3Q96JB5 506 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 PGBD1Q96JS3 809 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 CNPPD1Q9BV87 410 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 RHOBTB2Q9BYZ6 727 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 SMOC2Q9H3U7 446 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 RSAD1Q9HA92 442 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6□□□□□ -1.45
ATXN3-217ENST00000553287 ETAA1Q9NY74 926 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 PNMA8BQ9ULN7 279 aaPredicted RBP6□□□□□ -1.45
ATXN3-217ENST00000553287 KDM5CP41229 1560 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 SPATA31A3Q5VYP0 1347 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 CDC42BPBQ9Y5S2 1711 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 KIDINS220Q9ULH0 1771 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF518AQ6AHZ1 1483 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 A0A0B4J269 797 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 E2F8A0AVK6 867 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PPP3CBP16298 524 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 TUBB3Q13509 450 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PIN1Q13526 163 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF267Q14586 743 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PLS1Q14651 629 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PTPRRQ15256 657 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF362Q5T0B9 420 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PRIMA1Q86XR5 153 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 B3GALNT2Q8NCR0 500 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PSD4Q8NDX1 1056 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 TFAP2BQ92481 460 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 DDX17Q92841 729 aaKnown RBP5.99□□□□□ -1.45
ATXN3-217ENST00000553287 SLC35A4Q96G79 324 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 CGRRF1Q99675 332 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 PRDM13Q9H4Q3 707 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-217ENST00000553287 RAD54BQ9Y620 910 aa5.99□□□□□ -1.45
ATXN3-217ENST00000553287 TRIAP1O43715 76 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 CHRM2P08172 466 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 HDCP19113 662 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 CHRM3P20309 590 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 NDUFV1P49821 464 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 CACNA2D1P54289 1103 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 ELLP55199 621 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-217ENST00000553287 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-217ENST00000553287 RD3Q7Z3Z2 195 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 TPH2Q8IWU9 490 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 KLHDC4Q8TBB5 520 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 MYCBPAPQ8TBZ2 947 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 BBC3Q96PG8 261 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-217ENST00000553287 HEPHQ9BQS7 1158 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 AMBRA1Q9C0C7 1298 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 TINAGL1Q9GZM7 467 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-217ENST00000553287 SLC12A5Q9H2X9 1139 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 R3HDMLQ9H3Y0 253 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 ARMT1Q9H993 441 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 PTGFRNQ9P2B2 879 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 PCDHA6Q9UN73 950 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-217ENST00000553287 COX11Q9Y6N1 276 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 ITSN2Q9NZM3 1697 aa5.98□□□□□ -1.45
ATXN3-217ENST00000553287 CEP170BQ9Y4F5 1589 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 CCDC151A5D8V7 595 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 M0QYG6 137 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 MGST3O14880 152 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 TOM1O60784 492 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 SOAT2O75908 522 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 NXPH1P58417 271 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 ITIH3Q06033 890 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 TCF15Q12870 199 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 KHDC1LQ5JSQ8 128 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 ARHGEF25Q86VW2 580 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 BOLLQ8N9W6 283 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 PCSK9Q8NBP7 692 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 FAM98AQ8NCA5 519 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 FAM46DQ8NEK8 389 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 BRIX1Q8TDN6 353 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 LRGUKQ96M69 825 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 RTFDC1Q9BY42 306 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 TPSD1Q9BZJ3 242 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 SARS2Q9NP81 518 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 IL17RBQ9NRM6 502 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 SLC17A6Q9P2U8 582 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 STXBP5LQ9Y2K9 1186 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF142P52746 1687 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 SPATA31A6Q5VVP1 1343 aa5.97□□□□□ -1.45
ATXN3-217ENST00000553287 POLR2AP24928 1970 aaKnown RBP5.97□□□□□ -1.45
ATXN3-217ENST00000553287 TCOF1Q13428 1488 aaKnown RBP5.96□□□□□ -1.45
ATXN3-217ENST00000553287 STRCP1A6NGW2 1772 aa5.96□□□□□ -1.46
ATXN3-217ENST00000553287 ADM5C9JUS6 153 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms