RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 GCAP28676 217 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 ADSSP30520 456 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 RARRES1P49788 294 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 GAD2Q05329 585 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 CLNKQ7Z7G1 428 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 ZCCHC9Q8N567 271 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 RBBP8NLQ8NC74 664 aaPredicted RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 SCG3Q8WXD2 468 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 TTC17Q96AE7 1141 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 PRR11Q96HE9 360 aaPredicted RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 ARL8BQ9NVJ2 186 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 BTBD7Q9P203 1132 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 ARMCX1Q9P291 453 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 NUMBLQ9Y6R0 609 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 DENND3A2RUS2 1198 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 ATP2A1O14983 1001 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 GRIN3BO60391 1043 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 TCEA3O75764 348 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 CCNE2O96020 404 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 KRT1P04264 644 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 B3GNT9Q6UX72 402 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC7-230ENST00000552960 VCXQ9H320 206 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 ZNF408Q9H9D4 720 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 AGO4Q9HCK5 861 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC7-230ENST00000552960 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 DOCK1Q14185 1865 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 COL11A1P12107 1806 aaPredicted RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 LIN7AO14910 233 aaPredicted RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 SERPINB3P29508 390 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 CCNG1P51959 295 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 CENPCQ03188 943 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 TFDP1Q14186 410 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 C4orf50Q6ZRC1 276 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 TCP10LQ8TDR4 215 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 DENND1AQ8TEH3 1009 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 KCND2Q9NZV8 630 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 SLC17A7Q9P2U7 560 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 SCOCQ9UIL1 159 aa13□□□□□ -0.33
HDAC7-230ENST00000552960 G3BP2Q9UN86 482 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
HDAC7-230ENST00000552960 RLFQ13129 1914 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 PROSCO94903 275 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 ZCCHC18P0CG32 403 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 YY1P25490 414 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
HDAC7-230ENST00000552960 NFX1Q12986 1120 aaKnown RBP12.99□□□□□ -0.33
HDAC7-230ENST00000552960 TCEAL1Q15170 157 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 CYTH2Q99418 400 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 ANKFY1Q9P2R3 1169 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 ESRRAP11474 423 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-230ENST00000552960 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-230ENST00000552960 VHLP40337 213 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
HDAC7-230ENST00000552960 BBS9Q3SYG4 887 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 WASHC2DQ5SRD0 308 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 MFSD7Q6UXD7 560 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 TTC7BQ86TV6 843 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 PPFIBP2Q8ND30 876 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 CDCA5Q96FF9 252 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 EHMT1Q9H9B1 1298 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 PCDHB4Q9Y5E5 795 aa12.99□□□□□ -0.33
HDAC7-230ENST00000552960 A0A1B0GVG6 124 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 DNALI1O14645 258 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-230ENST00000552960 BAG2O95816 211 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 SLC1A1P43005 524 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 ARFIP2P53365 341 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 NR1H3Q13133 447 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 GPR162Q16538 588 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 ZNF394Q53GI3 561 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 C3orf62Q6ZUJ4 267 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 CENPUQ71F23 418 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 EEPD1Q7L9B9 569 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 TRIM55Q9BYV6 548 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 PSMC3IPQ9P2W1 217 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-230ENST00000552960 PHIPQ8WWQ0 1821 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 CCDC22O60826 627 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 NR3C2P08235 984 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 SKIP12755 728 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 EPHX2P34913 555 aa12.98□□□□□ -0.33
HDAC7-230ENST00000552960 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms