RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PPP1R37O75864 691 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 SUN1O94901 812 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 FDX1P10109 184 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PLEKHH3Q7Z736 793 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 TRPC7Q9HCX4 862 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PPARGC1AQ9UBK2 798 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ADCY3O60266 1144 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ARIH2O95376 493 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CYP3A7P24462 503 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MGAT5BQ3V5L5 792 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 DDIT4Q9NX09 232 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PABPN1LA6NDY0 278 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 NT5C1B-RDH14C9J2C7 533 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 SLC25A27O95847 323 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 SARNPP82979 210 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 SURF1Q15526 300 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CDC42EP4Q9H3Q1 356 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MAFGO15525 162 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MT-CO1P00395 513 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ADSSP30520 456 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 HOXD13P35453 343 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MAGEA4P43358 317 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 TAS2R40P59535 323 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 FMO1Q01740 532 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 MMGT1Q8N4V1 131 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 CDC26Q8NHZ8 85 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 PMPCBO75439 489 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 CCDC117Q8IWD4 279 aaPredicted RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 NXF3Q9H4D5 531 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 COPEO14579 308 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 AVPR1AP37288 418 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 LMNB2Q03252 620 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 EXOC8Q8IYI6 725 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 PRMT7Q9NVM4 692 aaPredicted RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 UVRAGQ9P2Y5 699 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 MYH10P35580 1976 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 CLGNO14967 610 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 TAF5Q15542 800 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 TFAP2DQ7Z6R9 452 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 SLC2A14Q8TDB8 520 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 KLC2Q9H0B6 622 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 TRABDQ9H4I3 376 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 DOT1LQ8TEK3 1739 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 EPHB1P54762 984 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 SPIRE1Q08AE8 756 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 LRRC36Q1X8D7 754 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 PTPRHQ9HD43 1115 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 ZNF214Q9UL59 606 aaPredicted RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 LRP6O75581 1613 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 RECQL4O94761 1208 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 KRT7P08729 469 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 EPHB2P29323 1055 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 RFC5P40937 340 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 ZNF473Q8WTR7 871 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-209ENST00000552516 CYB561D2O14569 222 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 APOL1O14791 398 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 AVILO75366 819 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 DEUP1Q05D60 604 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 IPMKQ8NFU5 416 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 HDAC11Q96DB2 347 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 CGRRF1Q99675 332 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 STRIP2Q9ULQ0 834 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 TADA2AO75478 443 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms