RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 TMLHEQ9NVH6 421 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 ITGB3P05106 788 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 CSH1P0DML2 217 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 CSH2P0DML3 217 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 WNT7BP56706 349 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 CCDC73Q6ZRK6 1079 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 TMEM86AQ8N2M4 240 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 MAB21L3Q8N8X9 362 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 C1orf127Q8N9H9 656 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 USP13Q92995 863 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-218ENST00000550771 CLIC6Q96NY7 704 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 C2orf42Q9NWW7 574 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 RBAKQ9NYW8 714 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-218ENST00000550771 TBC1D7Q9P0N9 293 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 AGAP1Q9UPQ3 857 aa22.23■■□□□ 1.15
CACNB3-218ENST00000550771 MORC2Q9Y6X9 1032 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-218ENST00000550771 FRMD3A2A2Y4 597 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 HUS1O60921 280 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 PRPF40AO75400 957 aaKnown RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 MYL7Q01449 175 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 BFSP1Q12934 665 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 RUNX3Q13761 415 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 TMEM196Q5HYL7 178 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 HEATR6Q6AI08 1181 aaKnown RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 MON1AQ86VX9 555 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 SYCP3Q8IZU3 236 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 CXorf38Q8TB03 319 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 NETO1Q8TDF5 533 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 MRPS31Q92665 395 aaKnown RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 SAAL1Q96ER3 474 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 PI4K2AQ9BTU6 479 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 HPS4Q9NQG7 708 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 TDP1Q9NUW8 608 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 GDAP2Q9NXN4 497 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 DDX43Q9NXZ2 648 aaKnown RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 UXTQ9UBK9 157 aaPredicted RBP22.22■■□□□ 1.15
CACNB3-218ENST00000550771 ITGA11Q9UKX5 1188 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 L1RE1Q9UN81 338 aa22.22■■□□□ 1.15
CACNB3-218ENST00000550771 EXTL3O43909 919 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 CASP5P51878 434 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 RPL10AP62906 217 aaKnown RBP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 AMPD2Q01433 879 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 GRSF1Q12849 480 aaKnown RBP eCLIP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 RESTQ13127 1097 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 SRSF5Q13243 272 aaKnown RBP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 ZNF268Q14587 947 aaPredicted RBP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 CSRP2Q16527 193 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 INTS6LQ5JSJ4 861 aaKnown RBP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.21■■□□□ 1.15
CACNB3-218ENST00000550771 WDR5BQ86VZ2 330 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 ZSWIM2Q8NEG5 633 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 TMEM206Q9H813 350 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 SEMA4GQ9NTN9 838 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 CCL26Q9Y258 94 aa22.21■■□□□ 1.15
CACNB3-218ENST00000550771 NCOR2Q9Y618 2525 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 TRDMT1O14717 391 aaKnown RBP22.2■■□□□ 1.14
CACNB3-218ENST00000550771 FOXD2O60548 495 aaPredicted RBP22.2■■□□□ 1.14
CACNB3-218ENST00000550771 NOL4O94818 638 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 IDEP14735 1019 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 GPR15P49685 360 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 RBP5P82980 135 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 TXNDC8Q6A555 127 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 CSGALNACT2Q8N6G5 542 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 TOP6BLQ8N6T0 577 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 TRMT2BQ96GJ1 504 aaKnown RBP22.2■■□□□ 1.14
CACNB3-218ENST00000550771 MYRFLQ96LU7 910 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 PKMYT1Q99640 499 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 CBWD1Q9BRT8 395 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 EBF3Q9H4W6 596 aa22.2■■□□□ 1.14
CACNB3-218ENST00000550771 MAGED2Q9UNF1 606 aaPredicted RBP22.2■■□□□ 1.14
CACNB3-218ENST00000550771 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.2■■□□□ 1.14
CACNB3-218ENST00000550771 CCDC163A0A0D9SF12 145 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 DCDC2BA2VCK2 349 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 OTOL1A6NHN0 477 aaPredicted RBP22.19■■□□□ 1.14
CACNB3-218ENST00000550771 KIAA0391O15091 583 aaKnown RBP22.19■■□□□ 1.14
CACNB3-218ENST00000550771 ATG13O75143 517 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 STAT6P42226 847 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 LHX1P48742 406 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 CFAP221Q4G0U5 840 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 TRIM68Q6AZZ1 485 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 FSTL4Q6MZW2 842 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 CC2D1AQ6P1N0 951 aaPredicted RBP22.19■■□□□ 1.14
CACNB3-218ENST00000550771 PRR23CQ6ZRP0 262 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 CHFRQ96EP1 664 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 PANK4Q9NVE7 773 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 SNX9Q9Y5X1 595 aa22.19■■□□□ 1.14
CACNB3-218ENST00000550771 GOLGA8IPA6NC78 632 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 GOLGA8JA6NMD2 632 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 TULP1O00294 542 aaPredicted RBP22.18■■□□□ 1.14
CACNB3-218ENST00000550771 GABRDO14764 452 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 SLC30A4O14863 429 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 TADA3O75528 432 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 SYT1P21579 422 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 ACAT1P24752 427 aaKnown RBP22.18■■□□□ 1.14
CACNB3-218ENST00000550771 CYP2F1P24903 491 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 PCSK1P29120 753 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 CEBPZQ03701 1054 aaKnown RBP22.18■■□□□ 1.14
CACNB3-218ENST00000550771 PDGFRLQ15198 375 aa22.18■■□□□ 1.14
CACNB3-218ENST00000550771 DDR2Q16832 855 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms