RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 RFX6Q8HWS3 928 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 ACTL9Q8TC94 416 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 P3H4Q92791 437 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 C12orf65Q9H3J6 166 aaKnown RBP9.69□□□□□ -0.86
UBE2N-205ENST00000550657 TRABDQ9H4I3 376 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 SLCO1B3Q9NPD5 702 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 RGS17Q9UGC6 210 aaPredicted RBP9.69□□□□□ -0.86
UBE2N-205ENST00000550657 HMGXB4Q9UGU5 601 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 CYTH4Q9UIA0 394 aa9.69□□□□□ -0.86
UBE2N-205ENST00000550657 FAM47DPA6NHR8 397 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 GRAP2O75791 330 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CA4P22748 312 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CDKN2BP42772 138 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ASPAP45381 313 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 EFNA5P52803 228 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 WDR4P57081 412 aaKnown RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ATF7IP2Q5U623 682 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 FITM2Q8N6M3 262 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 RSAD2Q8WXG1 361 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 KLHL29Q96CT2 875 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ANKRD36BP1Q96IX9 119 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 SPATC1LQ9H0A9 340 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ALG13Q9NP73 1137 aaKnown RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CNTN6Q9UQ52 1028 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 FAM189A1O60320 539 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ITGBL1O95965 494 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 NFICP08651 508 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 GCAP28676 217 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 RPA3P35244 121 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 BASP1P80723 227 aaKnown RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ENPEPQ07075 957 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CDO1Q16878 200 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 BBS9Q3SYG4 887 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 GJC2Q5T442 439 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CGB2Q6NT52 195 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 METTL7BQ6UX53 244 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 LBX2Q6XYB7 198 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CENPUQ71F23 418 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ZC3H18Q86VM9 953 aaKnown RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 KIAA0319LQ8IZA0 1049 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 FAM71DQ8N9W8 422 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 KCTD6Q8NC69 237 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 SMC6Q96SB8 1091 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CPXM1Q96SM3 734 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 MINDY3Q9H8M7 445 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ELP3Q9H9T3 547 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
UBE2N-205ENST00000550657 ARL2BPQ9Y2Y0 163 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 LOXHD1Q8IVV2 1947 aa9.68□□□□□ -0.86
UBE2N-205ENST00000550657 IGKV6D-21A0A0A0MT36 114 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 A8MUI8 341 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 FZD9O00144 591 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 USP2O75604 605 aaPredicted RBP9.67□□□□□ -0.86
UBE2N-205ENST00000550657 ITGB3P05106 788 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 HOXC6P09630 235 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 TAC1P20366 129 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 TFDP1Q14186 410 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 HIF1AQ16665 826 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 IER5Q5VY09 327 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 EFCAB12Q6NXP0 572 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 PPP1R21Q6ZMI0 780 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 MOB2Q70IA6 237 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 MAML1Q92585 1016 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 TWNKQ96RR1 684 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 SNCAIPQ9Y6H5 919 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 TCRBV7S3A2A0A539 114 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 M0QYV0 167 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 LRCH4O75427 683 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
UBE2N-205ENST00000550657 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 LSM8O95777 96 aaKnown RBP9.67□□□□□ -0.86
UBE2N-205ENST00000550657 NCALDP61601 193 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 MMRN1Q13201 1228 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 MSS51Q4VC12 460 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 RAB6CQ53S08 254 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 ZNF667Q5HYK9 610 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 FNBP1LQ5T0N5 605 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 RNASEH2BQ5TBB1 312 aaKnown RBP9.67□□□□□ -0.86
UBE2N-205ENST00000550657 SH3PXD2AQ5TCZ1 1133 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 NPNTQ6UXI9 565 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 ARFGAP1Q8N6T3 406 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 UBR7Q8N806 425 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBE2N-205ENST00000550657 PYROXD1Q8WU10 500 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 CPB2Q96IY4 423 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 MAGEB18Q96M61 343 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 RAB6CQ9H0N0 254 aa9.67□□□□□ -0.86
UBE2N-205ENST00000550657 XYLT2Q9H1B5 865 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms