RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 RBAKQ9NYW8 714 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 TBC1D7Q9P0N9 293 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 CLIC4Q9Y696 253 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 THADAQ6YHU6 1953 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PLXND1Q9Y4D7 1925 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 TPRP12270 2363 aaKnown RBP11.68□□□□□ -0.54
PFDN5-210ENST00000550513 MYMKA6NI61 221 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PDCP20941 246 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 CASP5P51878 434 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 WNT7BP56706 349 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 KCNA1Q09470 495 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-210ENST00000550513 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PRR23CQ6ZRP0 262 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PDCL2Q8N4E4 241 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 NETO1Q8TDF5 533 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 ACCSQ96QU6 501 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 STRA6Q9BX79 667 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 OLFML3Q9NRN5 406 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 TMLHEQ9NVH6 421 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 C2orf42Q9NWW7 574 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 DDX43Q9NXZ2 648 aaKnown RBP11.68□□□□□ -0.54
PFDN5-210ENST00000550513 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-210ENST00000550513 CCL26Q9Y258 94 aa11.68□□□□□ -0.54
PFDN5-210ENST00000550513 MYOFQ9NZM1 2061 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 EPG5Q9HCE0 2579 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 HRO43593 1189 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 HUS1O60921 280 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 KRT19P08727 400 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CSH1P0DML2 217 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CSH2P0DML3 217 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 IDEP14735 1019 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 GARTP22102 1010 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 ACAT1P24752 427 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 STAT6P42226 847 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 GPR15P49685 360 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 MYL7Q01449 175 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 ALCAMQ13740 583 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 RUNX3Q13761 415 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 INTS6LQ5JSJ4 861 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CEP68Q76N32 757 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 TMEM150AQ86TG1 271 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 WDR5BQ86VZ2 330 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 SYCP3Q8IZU3 236 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 TMEM86AQ8N2M4 240 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 LRRC52Q8N7C0 313 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 C1orf127Q8N9H9 656 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CACTINQ8WUQ7 758 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 MRPS31Q92665 395 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 MTMR12Q9C0I1 747 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 EBF3Q9H4W6 596 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 ABCB6Q9NP58 842 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 HPS4Q9NQG7 708 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 GKN1Q9NS71 199 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 SEMA4GQ9NTN9 838 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 TDP1Q9NUW8 608 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 AGAP1Q9UPQ3 857 aa11.67□□□□□ -0.54
PFDN5-210ENST00000550513 SRPRBQ9Y5M8 271 aaKnown RBP11.67□□□□□ -0.54
PFDN5-210ENST00000550513 SPTBN2O15020 2390 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 DCDC2BA2VCK2 349 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 GOLGA8IPA6NC78 632 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 GOLGA8JA6NMD2 632 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 TADA3O75528 432 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 F11P03951 625 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 TMEM191BP0C7N4 346 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 RESTQ13127 1097 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 CUL4AQ13619 759 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 CSRP2Q16527 193 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 TMEM196Q5HYL7 178 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 TXNDC8Q6A555 127 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 FSTL4Q6MZW2 842 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 PKN3Q6P5Z2 889 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 ADGRF2Q8IZF7 708 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms