RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 EFCAB13Q8IY85 973 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 PARD6AQ9NPB6 346 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 SEMA4GQ9NTN9 838 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 ADSSP30520 456 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 POLR2BP30876 1174 aaKnown RBP24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 CDR1P51861 262 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 NLRP12P59046 1061 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 CSRP2Q16527 193 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 WDR5BQ86VZ2 330 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 BRSK2Q8IWQ3 736 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 CSGALNACT2Q8N6G5 542 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 LRRC52Q8N7C0 313 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 SPATA18Q8TC71 538 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 LEO1Q8WVC0 666 aaPredicted RBP24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 PI4K2AQ9BTU6 479 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 TMEM206Q9H813 350 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 ABCB6Q9NP58 842 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 DDX43Q9NXZ2 648 aaKnown RBP24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 RBAKQ9NYW8 714 aaPredicted RBP24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 TBC1D7Q9P0N9 293 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 ITGA11Q9UKX5 1188 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 SLC8A2Q9UPR5 921 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 CLIC4Q9Y696 253 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 TSC2P49815 1807 aa24.82■■□□□ 1.56
SMARCD1-209ENST00000550477 DMXL1Q9Y485 3027 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 PPP1R37O75864 691 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 F11P03951 625 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 ITGB3P05106 788 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 KRT19P08727 400 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 LHX1P48742 406 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 RBP5P82980 135 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 STXBP4Q6ZWJ1 553 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 NOC3LQ8WTT2 800 aaKnown RBP24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 FAM83CQ9BQN1 747 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 SMG9Q9H0W8 520 aaKnown RBP24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 OLFML3Q9NRN5 406 aa24.81■■□□□ 1.56
SMARCD1-209ENST00000550477 CCDC163A0A0D9SF12 145 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 DCDC2BA2VCK2 349 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 MYMKA6NI61 221 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 KIAA0391O15091 583 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 PCSK1P29120 753 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 STAT6P42226 847 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 PDGFRLQ15198 375 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 USP49Q70CQ1 688 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 MON1AQ86VX9 555 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 PDCL2Q8N4E4 241 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 FSIP1Q8NA03 581 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 SAAL1Q96ER3 474 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 STRA6Q9BX79 667 aa24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-209ENST00000550477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 TRDMT1O14717 391 aaKnown RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 TMEM191BP0C7N4 346 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 HMGA1P17096 107 aaKnown RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 DMWDQ09019 674 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 MYO1EQ12965 1108 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 ZNF268Q14587 947 aaPredicted RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 TXNDC8Q6A555 127 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 PRR23CQ6ZRP0 262 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 SPATA2LQ8IUW3 424 aaPredicted RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 DDX1Q92499 740 aaKnown RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 USP13Q92995 863 aaPredicted RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 ANKRD36BP1Q96IX9 119 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 LRRC27Q9C0I9 530 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 EBF3Q9H4W6 596 aa24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 FBXO2Q9UK22 296 aaPredicted RBP24.79■■□□□ 1.56
SMARCD1-209ENST00000550477 SLC30A4O14863 429 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 EXTL3O43909 919 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 DRD1P21728 446 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 SURF1Q15526 300 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 FBXO43Q4G163 708 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 TMEM196Q5HYL7 178 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 INTS6LQ5JSJ4 861 aaKnown RBP24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 CACNA2D4Q7Z3S7 1137 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 CCDC65Q8IXS2 484 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 TOP6BLQ8N6T0 577 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 C1orf127Q8N9H9 656 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 CCDC26Q8TAB7 109 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 DNAJC19Q96DA6 116 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 LOXL4Q96JB6 756 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 PANK4Q9NVE7 773 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 GDAP2Q9NXN4 497 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 SNX9Q9Y5X1 595 aa24.78■■□□□ 1.56
SMARCD1-209ENST00000550477 DENND4CQ5VZ89 1909 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 USP17L7P0C7H9 530 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 CCDC192P0DO97 292 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 KCNA1Q09470 495 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 NR1H3Q13133 447 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 SRSF5Q13243 272 aaKnown RBP24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 DDR2Q16832 855 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 C4orf50Q6ZRC1 276 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 DPH6Q7L8W6 267 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 TMEM150AQ86TG1 271 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 CPA6Q8N4T0 437 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 CAMKK1Q8N5S9 505 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 FAM160A2Q8N612 972 aaPredicted RBP24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 TRMT2BQ96GJ1 504 aaKnown RBP24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 FUBP3Q96I24 572 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 CLIC6Q96NY7 704 aa24.77■■□□□ 1.56
SMARCD1-209ENST00000550477 IKZF4Q9H2S9 585 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms