RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 RHOT2Q8IXI1 618 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TRIM11Q96F44 468 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 VCPIP1Q96JH7 1222 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 C11orf70Q9BRQ4 267 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 OSGEPQ9NPF4 335 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 CHORDC1Q9UHD1 332 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 CYTH4Q9UIA0 394 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TSPAN16Q9UKR8 245 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 COG5Q9UP83 839 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 CEP83Q9Y592 693 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PCDHGC5Q9Y5F6 944 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TSC2P49815 1807 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 NRP1O14786 923 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 ATP2C2O75185 946 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 MTA2O94776 668 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 CYP11A1P05108 521 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 PFKMP08237 780 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
CACNB3-213ENST00000550064 RRM1P23921 792 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 GPD2P43304 727 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 SLC11A1P49279 550 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
CACNB3-213ENST00000550064 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
CACNB3-213ENST00000550064 LIN9Q5TKA1 542 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 DSEQ9UL01 958 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
CACNB3-213ENST00000550064 ENC1O14682 589 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 EFCAB14O75071 495 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 TADA2AO75478 443 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 DGKIO75912 1065 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-213ENST00000550064 AMHP03971 560 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
CACNB3-213ENST00000550064 ALDH2P05091 517 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 CALB1P05937 261 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 CCDC130P13994 396 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 TYMPP19971 482 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 ADORA2BP29275 332 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 DEFB103AP81534 67 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 LRRC57Q8N9N7 239 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 SYT15Q9BQS2 421 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 PRKAG2Q9UGJ0 569 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
CACNB3-213ENST00000550064 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 NCK2O43639 380 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 FTCDO95954 541 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 GALTP07902 379 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 WDR5P61964 334 aaKnown RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 PDCLQ13371 301 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 PTPN20Q4JDL3 420 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 CYP4A22Q5TCH4 519 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 PAPD7Q5XG87 772 aaKnown RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 OVOS1Q6IE37 1185 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 C7orf61Q8IZ16 206 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 ZNF564Q8TBZ8 553 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 BADQ92934 168 aa12.83□□□□□ -0.36
CACNB3-213ENST00000550064 CALR3Q96L12 384 aaKnown RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 HNRNPABQ99729 332 aaKnown RBP12.83□□□□□ -0.36
CACNB3-213ENST00000550064 GOLPH3Q9H4A6 298 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms